Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1127 ATGAGTTTACTTTGGAAAAACACTAAAATCATGGATTTCATAACACTCATCACATTTCTACTGTTCTTAACCCCTGCACCCTCTTCCTCCCAAAATCTTGGAAACAAAAACAACATAGTACTCACTAATCGAAAGATGATGTTCCTTAAACAAGAAAATCTAACCTCGTACGCTGTCATCTTTGATGCTGGTAGCACTGGAAGCCGTGTTCATGTTTACAATTTTGATCAGAACTTAAATCTTCTTCATATTGGTAACAATATTGAGTTTACTGACAAGATCAAACCAGGTTTGAGTGCTTATGCTGAAAATCCCGAAAAAGGAGCAAAATCTCTCATTCCACTTCTAGAAGAAGCAGAGAGTGTGGTCCCTGAGAATCTGCACTCCAAAACACTTCTTAAGCTTGGAGCAACAGCGGGTTTAAGGCTTTTGGACGGGGATTCAGCTGATAAGATATTGCAAGGGGTAAGGGATTTATTCAACAACAGAAGTACCTTTAAAGTTCAATCTGATGCTGTTTCTATTATAGATGGAACACAAGAAGGTTCTTATATGTGGGTGACAGTTAACTATGCATATGGGAATTTAGGAAAAAATTACAAAAATACAGTGGGAGTAATTGACCTTGGAGGTGGATCAGTTCAAATGACATATGCTGTCTCAAAGAAAACAGCACAAAATGCTCCAAAAGTTGCTGATGGAGAGGATCCATATATAAAGAAGCTTGTACTCAAGGGAAAACAATATGACCTCTATGTTCATAGTTACTTGAGCTTTGGTAAAGAAGCAACTCGAGCACAGGTTTTGAAGTCCACTAATGGATCTGCTAACCCTTGCCTTTTAGCTGGATTTAATGGGACCTTTACATATACAGGAGAGAAGTATACAGCTTTTGCCTCTCCTTCTGGCGCCAATTTTGATAAATGCAAAAATATAATTCTTAATAAAGTTCTTAAAGTGAATGCTCCATGTCCCTATTCTAATTGCACTTTTGGTGGAATATGGAGTGGTGGAGGAGGAAGTGGACAGAAAAATCTTTTTGCTGCTTCAGCTTTCCATTACTTGACTGAAGATGTTGGTTTGGTTGATCAAAATGTAGCTAATTCCAAAATTCATCCGGTAGATATAAGAAATGAAGCTAAGAGAGCCTGTGCATTAAACTTTGAGGATGTTAAATCCACTTATCCACTTCTTACGGAGGATAAACGTCCATATGTGTGCTTGGATCTCTTATACCAGCATCTATTGCTTGTTCGTGGATTTGGTTTAAAACAAAAACAAGAGATTACAGTGGGAGGAGGAATTCAATATCAAAATTCTGTTGTGGAAGCTGCATGGCCTCTAGGTACTGCTGTGGAAGCCATATCAGCCTTGCCTAAATTTGAGCGATTAATGTATTTTATTTAG 1407 0.3795 MSLLWKNTKIMDFITLITFLLFLTPAPSSSQNLGNKNNIVLTNRKMMFLKQENLTSYAVIFDAGSTGSRVHVYNFDQNLNLLHIGNNIEFTDKIKPGLSAYAENPEKGAKSLIPLLEEAESVVPENLHSKTLLKLGATAGLRLLDGDSADKILQGVRDLFNNRSTFKVQSDAVSIIDGTQEGSYMWVTVNYAYGNLGKNYKNTVGVIDLGGGSVQMTYAVSKKTAQNAPKVADGEDPYIKKLVLKGKQYDLYVHSYLSFGKEATRAQVLKSTNGSANPCLLAGFNGTFTYTGEKYTAFASPSGANFDKCKNIILNKVLKVNAPCPYSNCTFGGIWSGGGGSGQKNLFAASAFHYLTEDVGLVDQNVANSKIHPVDIRNEAKRACALNFEDVKSTYPLLTEDKRPYVCLDLLYQHLLLVRGFGLKQKQEITVGGGIQYQNSVVEAAWPLGTAVEAISALPKFERLMYFI* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1127 468 Gene3D - 57 451 - -
Tpr6g1127 468 Pfam GDA1/CD39 (nucleoside phosphatase) family 52 459 IPR000407 GO:0016787
Tpr6g1127 468 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 11 468 - -
Tpr6g1127 468 CDD NBD_sugar-kinase_HSP70_actin 59 218 - -
Tpr6g1127 468 Gene3D Exopolyphosphatase. Domain 2 177 440 - -
Tpr6g1127 468 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 468 IPR000407 GO:0016787
Tpr6g1127 468 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 176 191 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1127 Tpr-Chr6 11297955 11305074 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1127 57 457 Calmodulin-binding Proteins AT3G04080 51.122 7.74e-144 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1127 K14641 - ag:CAA83655 634.409