Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1125 ATGGAGTTCCTAATTAAACTCATCACTTTTCTACTCTTCTTAATGCCTTCAATCACTTCCTCACAATATATAAGAAACAACATATTCAACAATCGAAAAATATTCGCCAAACAAGAAACAATTTCCTCTTACGCTGTCGTTTTTGACGCCGGTAGCACTGGTAGCCGTATCCATGTCTACCTTTTTGATCAGAACTTAGATCTTCTTCACATTGGCAAAGCTGTTGAGTTTTTTAATAAGACAACACCTGGTTTGAGTGCATACGAAAATAATCCAGAACAAGCTGCAAAATCATTGATTCCACTTTTGGAGCAAGCAGAAAGAGTGGTTCCTAAGGACCTTCATCGCAAGACACCAGTTAGACTTGGGGCAACAGCAGGTTTAAGGCTTCTGAATGGGGATGCTTCCGAAAAGATACTGCAAGCGGTAAGGAATATGCTGAGCAACAGAAGTACCTTCAATGTCCAACCTGATGCAGTTTCTATTATTGATGGAACCCAAGAAGGTTCTTATTTATGGGTGACAGTTAACTATTTATTGGGGAATTTGGGAAAAAAGTACACAAAAACAGTGGGAGTAATGGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCAGTCTCAAAGAAAACAGCAAAAAATGCTCCAAAAGTTGCAGATGGAGATGATCCATACATTAAGAAGATTGTACTCAAGGGAAAACCATATGATCTCTACGTTCACAGTTACTTACACTTTGGTAGAGAAGCATCTCGAGCAGAGATTTTGAAAGTCACTCATAATTCTCCTAACCCTTGCATTTTAGCTGGATTTGATGGGACCTACACATATTCAGGAGAAGAGTTTAAGGCCACTGCCCCTGCTTCAGGGGCCAATTTTAAAGAATGCAAAAAGATAATTCGTAAAGCTCTTAAATTGAATTATCCATGTCCCTATCAAAATTGCACTTTTGGTGGAATTTGGAATGGTGGAAGGGGAAGTGGACAGAAACATCTCTTTGCTTCTTCATCTTTCTATTACTTACCAGAAGATGCTGGTTTGATTGATGCAAATATACCTAATTTCCAAATTCGTCCTGTGGATCTTGAGATTGAAGCTAAGAAAGCTTGTGCATTAAATTTTGAAGATGCTAAATCAACTTATCCACTTCTTGAGAAGAGAAATATAGTTTCATATGTATGCATGGATTTTATATATCAATATGTGCTGCTTGTTGATGGATTTGGTCTAGATCCATTGCAAGAGATTACATCAGGGAAGGAAATTGAATATGAAAATGCAGTTGTGGAAGCTGCATGGCCTCTAGGCAATGCTGTAGAAGCCATATCATCTTTACCTAAATTTGAAAGAATGATGTATTTTGTGTAA 1368 0.3794 MEFLIKLITFLLFLMPSITSSQYIRNNIFNNRKIFAKQETISSYAVVFDAGSTGSRIHVYLFDQNLDLLHIGKAVEFFNKTTPGLSAYENNPEQAAKSLIPLLEQAERVVPKDLHRKTPVRLGATAGLRLLNGDASEKILQAVRNMLSNRSTFNVQPDAVSIIDGTQEGSYLWVTVNYLLGNLGKKYTKTVGVMDLGGGSVQMAYAVSKKTAKNAPKVADGDDPYIKKIVLKGKPYDLYVHSYLHFGREASRAEILKVTHNSPNPCILAGFDGTYTYSGEEFKATAPASGANFKECKKIIRKALKLNYPCPYQNCTFGGIWNGGRGSGQKHLFASSSFYYLPEDAGLIDANIPNFQIRPVDLEIEAKKACALNFEDAKSTYPLLEKRNIVSYVCMDFIYQYVLLVDGFGLDPLQEITSGKEIEYENAVVEAAWPLGNAVEAISSLPKFERMMYFV* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1125 455 Gene3D Exopolyphosphatase. Domain 2 164 423 - -
Tpr6g1125 455 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 1 455 - -
Tpr6g1125 455 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 163 178 IPR000407 GO:0016787
Tpr6g1125 455 CDD NBD_sugar-kinase_HSP70_actin 46 205 - -
Tpr6g1125 455 Gene3D - 44 438 - -
Tpr6g1125 455 Pfam GDA1/CD39 (nucleoside phosphatase) family 40 446 IPR000407 GO:0016787
Tpr6g1125 455 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 455 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1125 Tpr-Chr6 11248937 11258768 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1125 15 444 Calmodulin-binding Proteins AT3G04080 53.132 1.85e-157 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1125 K14641 - ag:CAA83655 782.711