Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1123 ATGCTCAAACGTCCTAACCGTCAGGAGTCAATCTCCGATAAGATCTATAGATTTCGAGGAACTCTTCTCGTTGTTTCGATCCCTATCCTTCTCATCACATTCGTTCTCTATATGATGCCTTCGAGTGCGAATTATGAATCTGTCGGAGATTATGCCGTCATTAGTCGCAAAATTGCGCCGGATAAAAAATCTGGTAGCTCTTATGCCGTTATTTTCGATGCTGGTAGCTCCGGCAGCCGCGTTCACGTTTTTCATTTCGATCATAATCTAGATCTTGTTCACATTGGCAAAGATCTCGAACTTTTTGAGCAGATTAAACCAGGTTTGAGTGCTTATGCTCAGAATCCACAGAAAGCTGCAGAATCTTTGGTTTCACTTTTAGAAAAAGCGGAGAGTGTTGTTCCTCGTGAATTGCGATCAAAGACACCGGTTCGAGTTGGGGCAACTGCAGGTTTGAGGGCTTTGGAAGGGGATGCATCTGATAAGATATTGCAAGCGGTAAGGGATTTGCTTAAGAATAGAAGTCCATTGAAATCTGATGCTGATGCGGTTACAGTGCTGGATGGAACACAAGAAGGGGCTTATCAATGGGTTACTATTAACTATCTATTGGGAAACTTGGGAAAAGATTATTCAAAGACTGTCGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATTTCTGAGTCTGATGCTGCCATGGCTCCACAAGTAACGGATGGAGAGGATCCATATGTCAAGGAGATGTTCTTGAGGGGAAAAAAATATTACCTCTATGTTCACAGTTACTTGCGCTATGGTTTACTAGCAGCTCGTGCAGAAATTTTAAAGGCTTCTGGCGATGCTGAAAACCCGTGTATCTTATCCGGTTACGATGGATCTTACAACTATGGAGGAAAGTCATTTAAGGCTTCATCGTCTGGAGCAAGCTTAAATGAATGCAAAAGCATAGCTCTAAAGGCTCTCAAAGTCAATGAGTCAACATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGAGGTGGGGATGGACAGAAAAACCTATTTGTTGCCTCATTTTTCTTTGACCGGGCTGCTGAGGCTGGTTTTGCTAATCCAAACTCACCAGTTGCAATAGTCCGTCCTGCGGATTTTGAGGATGCTGCCAAGCAGGCTTGTCAAACAAAACTCGAGAATGGCAAATCCACGTATCCACGAGTTGAAGAGGGGAACCTTCCATATCTTTGCATGGATCTTGTATACCAGTATACATTGCTTGTTGATGGGTTTGGCATATATCCATGGCAAGAGATTACATTGGTAAAAAAAGTTAAATACGAAGATGCCCTTGTTGAGGCAGCTTGGCCGCTGGGAAGTGCCATTGAAGCTGTATCATCTACGTAA 1404 0.433 MLKRPNRQESISDKIYRFRGTLLVVSIPILLITFVLYMMPSSANYESVGDYAVISRKIAPDKKSGSSYAVIFDAGSSGSRVHVFHFDHNLDLVHIGKDLELFEQIKPGLSAYAQNPQKAAESLVSLLEKAESVVPRELRSKTPVRVGATAGLRALEGDASDKILQAVRDLLKNRSPLKSDADAVTVLDGTQEGAYQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISESDAAMAPQVTDGEDPYVKEMFLRGKKYYLYVHSYLRYGLLAARAEILKASGDAENPCILSGYDGSYNYGGKSFKASSSGASLNECKSIALKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFANPNSPVAIVRPADFEDAAKQACQTKLENGKSTYPRVEEGNLPYLCMDLVYQYTLLVDGFGIYPWQEITLVKKVKYEDALVEAAWPLGSAIEAVSST* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1123 467 PANTHER APYRASE-LIKE PROTEIN 1 467 - -
Tpr6g1123 467 Gene3D - 68 461 - -
Tpr6g1123 467 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
Tpr6g1123 467 Gene3D Exopolyphosphatase. Domain 2 188 445 - -
Tpr6g1123 467 CDD NBD_sugar-kinase_HSP70_actin 70 229 - -
Tpr6g1123 467 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 467 IPR000407 GO:0016787
Tpr6g1123 467 Pfam GDA1/CD39 (nucleoside phosphatase) family 65 466 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1123 Tpr-Chr6 11232843 11238420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1123 7 466 Calmodulin-binding Proteins AT3G04080 70.130 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1123 K14641 - gmx:100786073 832.402