Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1107 ATGGAAACCACTAGCCAAGAAACTCCAATTCTTCTTCAAGACATGAAGGTGACAATCCACAAAACTTCAATGATTTTTCCATCAAAACTAACCGAGAAAAAATCCTTGTTCTTATCAAACATAGACAAGGTTCTCAATTTCGACGTAAAAACGGTTCATTTTTTCGAAGCAAACCAAGATTTTCCTCCTCAAATAGTGACTGAGAAGTTAAAGAAAGCTCTAGAAGATGTTCTAGTGGCTTATGACTTCCTTGCTGGAAGAATAAAGATGAACTCTGAAACCAATAGGTTGGAGATAGATTGTAATGCAAAAGGTGTTGGCTTTGTTGTGGCATCTAGTAAATATAAATTGGATCAACTTGGGAACTTGGCTTATCCTAACAAAGCTTTTGCACAATTAGTTCACAAGACTAAAGATTTCCTTAAGATAGGTGATATACCACTATGTGTTGTCCAGCTAACATCCTTCAAGTGCGGTGGTTTCTCAATTGGCATCACAACTAGCCATGCAACCTTTGATGGGCTTAGCTTCAAAACATTCTTAGACAACCTTGCTTCATTGGCTGCTAACAAGCCACTGGCTACTAACAAGCCACTGGCTGTGATACCCTTCAATGAAGAATATAAAGATGAAGAAGGTACTGCAGATGGAAGTATGGAGGAAGATGGGATAAATGCATAG 681 0.3833 METTSQETPILLQDMKVTIHKTSMIFPSKLTEKKSLFLSNIDKVLNFDVKTVHFFEANQDFPPQIVTEKLKKALEDVLVAYDFLAGRIKMNSETNRLEIDCNAKGVGFVVASSKYKLDQLGNLAYPNKAFAQLVHKTKDFLKIGDIPLCVVQLTSFKCGGFSIGITTSHATFDGLSFKTFLDNLASLAANKPLATNKPLAVIPFNEEYKDEEGTADGSMEEDGINA* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1107 226 Pfam Transferase family 15 199 - -
Tpr6g1107 226 Gene3D - 11 209 IPR023213 -
Tpr6g1107 226 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 205 - -
Tpr6g1107 226 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 13 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1107 Tpr-Chr6 10641360 10643055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1107 15 188 Monolignol Biosynthesis Gene Families AT5G48930 36.517 6.46e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1107 K13065 - gmx:100780971 300.056