Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1062 ATGTCAATTTCTCTTGCACCGATAATTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATATCTATACTACTTATATGGCTATGTTTGTTTCGCCAAACAAGTGTTTCTAGGACTTCAGAGACAGGGTCATCTGATCCTTCACAAGTGGGAAGACATGGTGGAATGGAGTCACAAATGCGAGATACTAGGCGTTTTGCAATGGAAGAACTTTCACATGCAACAAAGAATTTCAGTGACAAAAATTTGATTGGAGAAGGAAAATTTGGTGAGGTTTACAAAGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAGAAGCGTCACGCTGCCACAAGCCAGGAATTTGTTGACGAGGTGCGCTATCTTTCAGCTATTCAACATCGGAATCTCGTAACTCTTATTGGATACTGCCAAGAAAACAATCTACAGTTTCTTATATATGAATATGTGCCAAATGGAAGCGTCTCCAGTCACTTGTATGGTGCTACTCAACAACCGCGGGAGAAGCTAGAATTCAAGCATAGACTCTCGATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCTTTGAGTCCCCGTTTGGTGCATAAGAATTTCAAAACATCTAATGTTCTTGTTGATGAAAACTTCATTTCTAAGGTCGCGGATGCAGGGCTTCGTAATTTTCTAGGGAGAGTTGACATTGCAGGCTCATCTTCTCAAGTGGCATCAGATGAGATATTCCTTGCACCTGAGGTGAGAGAGTTCAGACAATTTTCTGACAAGAGCGATGTGTATAGCTTTGGGGTATTTTTGCTAGAATTGTTGAGTGGAAAGGAAGCAACAGAATCACCCTCTATAAACACAAGTCAAAATCTGGTCGAATCGGTACTAAGTAATCAAGATAGTAGCATTATGTCTGCAATCATTGATCAAAGAATGGAGAGTAGATTTACAGCTGAAGGCATGGAAAATTACATCCTACTCTTAATAAGATGTTTGGATCCTTCAAGTGAAAGAAGACCTGCCATGAGCTATGTTGAAATGGAACTCGATCGAATCCTCGAAAAAGAAATGAACTTGACAACAATGATGGGTGAAGGAACACCAACTGTGACTCTTGGAAGTCAATTATTCAAATCAACTAAATAA 1140 0.4079 MSISLAPIIGGAAGAVALVGISILLIWLCLFRQTSVSRTSETGSSDPSQVGRHGGMESQMRDTRRFAMEELSHATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRHAATSQEFVDEVRYLSAIQHRNLVTLIGYCQENNLQFLIYEYVPNGSVSSHLYGATQQPREKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKNFKTSNVLVDENFISKVADAGLRNFLGRVDIAGSSSQVASDEIFLAPEVREFRQFSDKSDVYSFGVFLLELLSGKEATESPSINTSQNLVESVLSNQDSSIMSAIIDQRMESRFTAEGMENYILLLIRCLDPSSERRPAMSYVEMELDRILEKEMNLTTMMGEGTPTVTLGSQLFKSTK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1062 379 ProSiteProfiles Protein kinase domain profile. 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1062 379 MobiDBLite consensus disorder prediction 40 59 - -
Tpr6g1062 379 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 379 - -
Tpr6g1062 379 Gene3D Phosphorylase Kinase; domain 1 50 150 - -
Tpr6g1062 379 Pfam Protein tyrosine and serine/threonine kinase 82 346 IPR001245 GO:0004672|GO:0006468
Tpr6g1062 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 379 - -
Tpr6g1062 379 Gene3D Transferase(Phosphotransferase) domain 1 151 365 - -
Tpr6g1062 379 SUPERFAMILY Protein kinase-like (PK-like) 58 344 IPR011009 -
Tpr6g1062 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1062 Tpr-Chr6 10000955 10005184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1062 1 352 Receptor kinase-like Gene Family AT1G30570 35.467 5.46e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Tpr6g1062 PK_Tyr_Ser-Thr 3.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1062 - - cam:101513575 652.129