Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1060 ATGGATTCAACACGCACCAAAGCACAAAACTCAGTTACGGAAGGCGAAATTAACGAAGTTGTCGAAGTTAGGCGACCTGTTGTGCTTGGCCTTTTTGCAACGGGAATTGTTCCAGCTGGTAAACCAAGAAGTCCTCCTAATGTGCCGCAGCCGATAGAAATTGACACATCGTCTCATTTTGCGACTGATAGGGAAGAGAACGACAGAGATGAGTTGATCAAATGGGCTCGAAGCGTGTCGCAAAGTTTAAGGTTCGCAATTATAGTTAGGCGATCCGATTCGGGCGAGAAGAGAAAGGCTCAATTGGTGTTAGAGTGTGAACGTAGTGGGAAGTATGTTCCAGCCAAGAAGAAGTTGAAATCCGATACCTCCGGAACAAGAAAATGCGAATGTCCTTTCCGACTCCGTGGGTATTACAACAAGGCAACAAAACTATGGCGTTTGACTGTTGTCAACGATATGCATAACCACGAGTTGGACAAAGGGCTTGAAGGGCATCTCGTGGCGGGGCGTTTGAAACCGCAAGAGAAGGAATTTATGGACGAGATGACAAGGAATGCGGTCGCTCCAAAAAACATATTGTCCACATTAAAGGAGAGAGATCCGGAAAACAAGACCTCTGCAAAGCAAGTGTACAACGCTCGTCATAGGTACAGAGTTAAAATGAGGGCGTCCATGACTGAGATGCAACACTTATGTAAGAAGCTTGATGATAACAAGTACTACTACAAGTATCGGACGGTTGTTGAAGATGGAGTAGAACATCTTCAAGATATATTCTTTGCACATCCGAGGTCCATAACTTTATTGAACTCTTTTCATACTGTGCTGATGATGGACTCCACATACAAAACCAGCAAGTACAAAATGCCGCTGTTTGAGATAGTCGGATTCACTTCGACTGAGAAGACATTCAACGTTGCTTTTGCCTGGCTCAGTAACGAAAAGGAAGACAACTTTATATGGGCTCTGCAACAACTACGTTGTTTGTTAAGGCGTGAGACAAATTTGCCGAAGGTTATTTTGACGGATCGAGATTTAGCTTTGATGAATGCTATTCCGGCTGTGTTTCCAGAAGCGGCGGCGTTGGTTTGTCGGTTCCATGTTAAGAAGAATGTGAGGACCAAGGCAGCCGAGCTGGTCAAGGTGAGGGATGGGGAAAAGGTCAAGGCGGCGGACATGAGGGAAAGAGTCTGTTTGGCGTTCGAGGATGTGTTAGATTCGTCTACTGAGGCTGAGTATACTGAAAATGTTATGGCTTTTAGGAAGTTATGTGAGAGGTGGCCAAAATTTGTTCGGTACGTTGAAGAGACAATTTTGGACACCGACAAAGAGAAGCTCGTGAGTGCATGGGTGGACAAGTATATGCACATGGGCAACCATACGACAAATAGAGCCGAAAGCGCACACGGTGTTTTGAAAAGTTACTTGACCGACGGTCTCGGTGATTTGGTGAAGGGTTGGGAATCGATTCACAGAATGTTAGGCAATCAATTCACCCAAGTGCAAACTGAATTTGGCCAGAACATGTCTGTGTATGGACACACATACCGGAAGAAAACACTTTACTCGACTTTGATGTTTAAAGTCTCTAGACGTGCAATGAGATACATCCACACTGAATCAAAAAGAGTCGAGTTTACTGGTATGGATAGCATGAAGTGTGGTTGTCTGATGAGGACTAACTACGGGCTGCCATGTGCGTGTTTGATTGCCAAGAAACTGCACCACAATAGGCCTATTAGACTCGATGAGGTTTACAAACATTGGAAGATAATTTGTTTCCAAGATGAAGAAGTTGGTGGCGACGTCGAGGACGATTATGCGTGCACGGCAGAGTGGCAAGCAATTCAGGAACGATTGAGGACAGCTGATGTAAGCATGAAAAATGAGATCCGAGATCAACTCCGCAAGATTGCGTATCCTACAACCACCGATGTGGAGCCTCCGACCACAAATGTAAAATCAAAAGGGGCTAAAAAGAAAAAGGTGGTCCGTGGAACAAGATCCACCAGCAGAGATAAGTCTCGATGGGAGCATGTTGAAGAATATTTCACGGAGACACAAGCGTCGCAATCGTCAAAGCCGTCTCCGTCAATTCCGTCCCACTCAAGGCCATCATCATCACAACCTACCGCATCAAACCCTATGCCTACGGTGTCTGAAGCTCCGCTCACTGTGTCTAACCCATTGCCACTAACCTCATCATCTCAAATTTTTGGAATTAACCACATGCCAAAATTCATGCATCCCTTCATTGAAGATATCATCAACGTGGACGGCGACGGCTATTGTGGTTACCGTGCCGTTGCATTGGCTCAGAGAGGCAACGAAGATGATTTTGAACTGATACGGTGCAACATGAGCAGGGAGTTGCGATTGAATAAGGATATGTATGTTGCTATATTTGGTTGCGAGGAGCGTTACCAATATATCTGTGATGCACTACTCCCACCCCCAAGGACGAGACAACGTACTAGTATTAGGAATAGTGTTGCACCGATGGATAAATGGTTCACGTTGCCGGATATGGGACATATCGTGGCCACCATATTGGATAGAGTAGTTGTTCAGCTCTCCATACTTCAAAACGGCCCTTGTGAAACTTTTTTCCCATTGCGTTCCATTCCGTCACCAAACCCGTCTTCAAGGGTTATTTGCCTTGGCGCGTTACCGGATCACTATGTTTTGGTAAAGCTTAAAGTTGGGTGTCCGATACCCAAATCAAACAAGTCGTGGAAGCAATATTGTGCTAAACAAAGTTTGGGTTGGGAAGATTCATTCATAGCTGCGCAACATAGGTTCGAGGAGATGATGAGCACCGAGAACGTTGTCCCCATCAAAATAGTTGGTGCAGGCAGTAGAGAAACTCCATTGGTGATTGACTGA 2889 0.4534 MDSTRTKAQNSVTEGEINEVVEVRRPVVLGLFATGIVPAGKPRSPPNVPQPIEIDTSSHFATDREENDRDELIKWARSVSQSLRFAIIVRRSDSGEKRKAQLVLECERSGKYVPAKKKLKSDTSGTRKCECPFRLRGYYNKATKLWRLTVVNDMHNHELDKGLEGHLVAGRLKPQEKEFMDEMTRNAVAPKNILSTLKERDPENKTSAKQVYNARHRYRVKMRASMTEMQHLCKKLDDNKYYYKYRTVVEDGVEHLQDIFFAHPRSITLLNSFHTVLMMDSTYKTSKYKMPLFEIVGFTSTEKTFNVAFAWLSNEKEDNFIWALQQLRCLLRRETNLPKVILTDRDLALMNAIPAVFPEAAALVCRFHVKKNVRTKAAELVKVRDGEKVKAADMRERVCLAFEDVLDSSTEAEYTENVMAFRKLCERWPKFVRYVEETILDTDKEKLVSAWVDKYMHMGNHTTNRAESAHGVLKSYLTDGLGDLVKGWESIHRMLGNQFTQVQTEFGQNMSVYGHTYRKKTLYSTLMFKVSRRAMRYIHTESKRVEFTGMDSMKCGCLMRTNYGLPCACLIAKKLHHNRPIRLDEVYKHWKIICFQDEEVGGDVEDDYACTAEWQAIQERLRTADVSMKNEIRDQLRKIAYPTTTDVEPPTTNVKSKGAKKKKVVRGTRSTSRDKSRWEHVEEYFTETQASQSSKPSPSIPSHSRPSSSQPTASNPMPTVSEAPLTVSNPLPLTSSSQIFGINHMPKFMHPFIEDIINVDGDGYCGYRAVALAQRGNEDDFELIRCNMSRELRLNKDMYVAIFGCEERYQYICDALLPPPRTRQRTSIRNSVAPMDKWFTLPDMGHIVATILDRVVVQLSILQNGPCETFFPLRSIPSPNPSSRVICLGALPDHYVLVKLKVGCPIPKSNKSWKQYCAKQSLGWEDSFIAAQHRFEEMMSTENVVPIKIVGAGSRETPLVID* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1060 962 MobiDBLite consensus disorder prediction 685 718 - -
Tpr6g1060 962 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 102 567 - -
Tpr6g1060 962 MobiDBLite consensus disorder prediction 669 684 - -
Tpr6g1060 962 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 102 567 IPR031052 GO:0006355
Tpr6g1060 962 Pfam Transcription factor AFT 108 159 IPR014842 GO:0000981|GO:0036086
Tpr6g1060 962 Pfam MULE transposase domain 276 372 IPR018289 -
Tpr6g1060 962 MobiDBLite consensus disorder prediction 641 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1060 Tpr-Chr6 9981933 9985561 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g1060 MULE 1.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1060 - - vun:114181823 548.51