Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1055 ATGTCTCTCTTTTTTCATCTTCTTCTTCTTCTTCACTTTCTTCTCTTCACAACCCATCACACAAATGCCTTCAATCCTTCCATTCCCACCGACGCATTGTCTCTTCTCACTTTCAAACACTTCGTCTCTTCTGACCCTTCAAATCTTCTCTCCGGTTGGACCCATTTTTCATCTTCTACATTCTGTAACTGGCACGGCGTCACTTGCGGCGGTGGAGATGGCAGAGTGACGTCACTTAATGTTACCGGTCTTCGCGGCGGTGAATTGGCAGCTTCTATTGGAGATTTGTCTCAGCTTCGAGTTTTGTCTATTCCGGGAAACATGTTTTCCGGTGAGATTCCGGTGAGTTTACTTAATCTCCGGGAACTTGAGGTTCTTGAGGTTCAAGGAAACAACTTTTCAGGGAAAGTTCCTTTTTTTAAGATGAGTTGTTTTGAAAAGCTTAAACTTGTTAATCTTTCTGGTAATGCTTTTTCTGATTCTATTCCCAATGGGTTGGTTTTTACTAGGAATGTGAAAATTGTTGATTTGTCTAGTAATCAATTTTCTGGTTCCATTCCTTTGAATGATTCTAGTAGTTGTGATTCTTTGAAGTATTTGAAACTGTCTCATAATTTTTTGAGGGGTGAGATTCCACCACAAATTGGGAAATGTAGAAACTTGAGGACCCTTTTGGTTGATGGTAATATATTGGAAGGTGAAATCCCTTATGAGATTGGGAATATTGTTGAACTTAGAGTTTTAGATGTTTCTAGAAACAGTCTCACTGGAAGGATCCCTAAACAGCTAGCTAATTGTTTGAAATTGTCTGTGCTTGTGCTTACTGATTTGTTTGAAGATCGTGACGGTTATGGTGAGGGGAGTTTGGTGGATGATAGGTTTAGAGGTGAATATAATGCTTTTGTTGGGAAAATTCCTCATGAATTGTTGTTGCTTTCGAGTTTGCGGCTTTTGTGGGCGCCTAGAGCGAATCTCGGTGGACGATTGCCTCTTGCTGGATGGACAGATTCATGCTCTCTTAGAATACTCAATTTGGCTGAGAATTATGTTACTGGTGTTGTGCCCGAGAATTTGGGGATGTGTAAGAATTTGACTTTCTTGGACTTGAGTTCTAACAATTTAGTCGGATACCTATCTCTGCATCAGCTTCGGGTTCCTTGTATGACGTATTTCAATGTAAGCAGGAATAATATATCTGGTTTGCTTCCGGGATTTAGGAAAGAAAGGTGTAAATTGAGAAGTGTCGTTGCCCTAGAACTTAACTTTCTAGAATTGGAGGGTCTGAATGATGCATACTTTAACATTCCTGTTTTGAGATTTCAACAGAATGCTTTCATCAGATCAGGTTTCGAAGAGACTATTGTCATTAGCCATGATTTCAGTTGGAACAGTTTCGCAGGGTCTTTACCGTTGTTTTTTCTTGGAGATGATCTTTTTATTCCTACTCGTAATGTATCCTACATGCTGTCTCTCAATAATAATAAATTCAACGGAACTATTCCACACCGACTAGTTTTAAACTGTAATGACCTGAAGACATTGTCAGTTAACCTGAGTGCGAATCAACTATCTGGTGAAATTTCTCAAGCATTGTTTCTTGACTGCCTGCAGTTGACGGATTTTGAAGCGGCATATAATCAAATTGATGGATCAATTGTACCTAGTATAGGTGAGCTGGCGTTGCTTCAGCGTCTTGATTTGAGTGGTAACAAACTATCAGGAGCACTGCCAAATGAGTTGGGAAACCTGAAAAACATGAAATGGATGCTTTTAGGAGGAAACAATCTGACAGGGGAAATTCCTTACCAATTTGGTGGATTGACGTCGCTTGTTGTTTTGAATGTATCTCACAATGCTCTAATTGGAACAATTCCAACAACTTTGACAAATGCAACAAGTCTTGAAATTCTGTTACTAAACCACAACAACCTTTCTGGAGAAATACCTTTATCTGTTTCTGCTCTTTCGAAGCTTGTTCAACTAAATGTTTCCTTCAACAATCTTTCCGGTCATATTCCATATCTTCAACACCCGAGTGATTGCAATTCATATATAGGGAATAAAAACTTGCACTCTTGCCCTGATCCATACTCTGACCCACCTTTCCTAGTTCCTCTTGCAGTCAATAATTCACATAGTCGTAGAGGGAGGAAAGTAAAGACCGTGGTTATTGCGCTGGCCATTTCTGCTTTTGTGGCTCTCTGCATACTTTTGGGAAGACTGTTGGTTATTTGTTTTAGAAGGAGTAAAATTACTCGGGTCAGCAGCATCAGAAGGCAAGAAGTGGTAACCTTTCAAATTGTTCCAATAGAATTGAGTTATGATAATATTGTCACAGCTACCGGAAATTTCAGCATCCGGTATCTAATCGGCACAGGTGGCTTCGGGTCAACTTACAAGGCAGAGCTATCCCCAGGTTTTTTTGTTGCCATAAAGAGGCTGTCAATAGGTAGGTTTCAAGGCATTCAACAGTTCGAAACAGAAATAAGGACGCTTGGGAGAATTCGACACAAGAATCTTGTGACTCTAATTGGCTATTATGTAGGAAAAGCTGAAATGTTGTTAATTTACAATTACCTCTCTGGTGGAAACCTTGAAGGTTTTATACGGTCAGGGAAAAATGTAAAGTGGCCGGTTATTTACAAAATTGCGAAAGACATTGCCAAGGCCCTTGCTTACCTTCATTATGATTGTGTTCCTCGAATAATTCACCGAGATATCAAGCCTAGCAACATTTTACTCGACGGAAATCTAAATGCCTACCTGTCCGATTTTGGCTTGGCACGGCTGCTTGAGGTATCCGAGACTCATGCCACTACCGATGTGGCCGGCACGTTTGGTTATGTTGCACCTGAATATGCCATCACTTGTAGGGTTTGCGATAAGGCCGATGTTTATAGCTACGGTGTGGTGCTATTAGAATTGATATCAGGAAAAAGGTCTCTTGATCCATCGTTTTCCAGTTATGGAAATGGATTCAATATTGTACCATGGGCGGAGCTGCTACTGACTGAAGGTCGTTGTTCTGAGCTATTTTCGTCAACTTTGTGGGAATCAGGACCTAAGGAAAAGTTGATGGGGCTTCTAAAGATTGCATTAACATGCACCGTAGAGACTCGTTCTATCCGACCATCAATAAAGATTGTACTTGACAAATTGAAACAGTTGAAAAGTTAA 3177 0.4032 MSLFFHLLLLLHFLLFTTHHTNAFNPSIPTDALSLLTFKHFVSSDPSNLLSGWTHFSSSTFCNWHGVTCGGGDGRVTSLNVTGLRGGELAASIGDLSQLRVLSIPGNMFSGEIPVSLLNLRELEVLEVQGNNFSGKVPFFKMSCFEKLKLVNLSGNAFSDSIPNGLVFTRNVKIVDLSSNQFSGSIPLNDSSSCDSLKYLKLSHNFLRGEIPPQIGKCRNLRTLLVDGNILEGEIPYEIGNIVELRVLDVSRNSLTGRIPKQLANCLKLSVLVLTDLFEDRDGYGEGSLVDDRFRGEYNAFVGKIPHELLLLSSLRLLWAPRANLGGRLPLAGWTDSCSLRILNLAENYVTGVVPENLGMCKNLTFLDLSSNNLVGYLSLHQLRVPCMTYFNVSRNNISGLLPGFRKERCKLRSVVALELNFLELEGLNDAYFNIPVLRFQQNAFIRSGFEETIVISHDFSWNSFAGSLPLFFLGDDLFIPTRNVSYMLSLNNNKFNGTIPHRLVLNCNDLKTLSVNLSANQLSGEISQALFLDCLQLTDFEAAYNQIDGSIVPSIGELALLQRLDLSGNKLSGALPNELGNLKNMKWMLLGGNNLTGEIPYQFGGLTSLVVLNVSHNALIGTIPTTLTNATSLEILLLNHNNLSGEIPLSVSALSKLVQLNVSFNNLSGHIPYLQHPSDCNSYIGNKNLHSCPDPYSDPPFLVPLAVNNSHSRRGRKVKTVVIALAISAFVALCILLGRLLVICFRRSKITRVSSIRRQEVVTFQIVPIELSYDNIVTATGNFSIRYLIGTGGFGSTYKAELSPGFFVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMLLIYNYLSGGNLEGFIRSGKNVKWPVIYKIAKDIAKALAYLHYDCVPRIIHRDIKPSNILLDGNLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYAITCRVCDKADVYSYGVVLLELISGKRSLDPSFSSYGNGFNIVPWAELLLTEGRCSELFSSTLWESGPKEKLMGLLKIALTCTVETRSIRPSIKIVLDKLKQLKS* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1055 1058 ProSitePatterns Serine/Threonine protein kinases active-site signature. 902 914 IPR008271 GO:0004672|GO:0006468
Tpr6g1055 1058 Gene3D Phosphorylase Kinase; domain 1 746 859 - -
Tpr6g1055 1058 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 9 1057 - -
Tpr6g1055 1058 Pfam Leucine Rich Repeat 245 266 IPR001611 GO:0005515
Tpr6g1055 1058 SMART serkin_6 784 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1055 1058 CDD STKc_IRAK 790 1056 - -
Tpr6g1055 1058 ProSitePatterns Protein kinases ATP-binding region signature. 790 812 IPR017441 GO:0005524
Tpr6g1055 1058 ProSiteProfiles Protein kinase domain profile. 784 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1055 1058 Pfam Leucine rich repeat 562 620 IPR001611 GO:0005515
Tpr6g1055 1058 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Tpr6g1055 1058 SUPERFAMILY L domain-like 93 679 - -
Tpr6g1055 1058 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 9 1057 - -
Tpr6g1055 1058 Pfam Protein kinase domain 789 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1055 1058 Gene3D Ribonuclease Inhibitor 484 699 IPR032675 -
Tpr6g1055 1058 Gene3D Ribonuclease Inhibitor 294 476 IPR032675 -
Tpr6g1055 1058 Gene3D Ribonuclease Inhibitor 27 85 IPR032675 -
Tpr6g1055 1058 SUPERFAMILY L domain-like 488 597 - -
Tpr6g1055 1058 SUPERFAMILY Protein kinase-like (PK-like) 761 1053 IPR011009 -
Tpr6g1055 1058 Gene3D Transferase(Phosphotransferase) domain 1 860 1057 - -
Tpr6g1055 1058 Gene3D Ribonuclease Inhibitor 86 277 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1055 Tpr-Chr6 9946329 9951119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1055 30 1057 Receptor kinase-like Gene Family AT3G02130 42.793 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Tpr6g1055 Pkinase 8.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1055 - - cam:101512699 1696.79