Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1046 ATGGCGGGCAAACGAGAGCTTGTGCTAGGTATCTGTGCCCCGGGAATTGTTGAGGTTCCGCCTGATAAACCTCCATCTAGACCTGTTGCATATGAGATTGATACATCAGATCATTTTTACACTGAAATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGAGATTGCCTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGCAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCCGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAATGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATTTGGTTCCGCCTAAGAATATAATGTCCACATTGAAAGATAGGGATCCAAACAACAAGACAACGGCAATAATCCATCCCTGA 576 0.4566 MAGKRELVLGICAPGIVEVPPDKPPSRPVAYEIDTSDHFYTEMATPDRDELIRWAREIALKLKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLRGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTAIIHP* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1046 191 Pfam Transcription factor AFT 88 138 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1046 Tpr-Chr6 9844309 9845328 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g1046 AFT 4.4e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1046 - - mtr:MTR_1g099140 137.502