Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1021 ATGACTAACTCATCAGAATCTTCTTCTCGTAGAACAATGATCCCTTCATTTCTCTACGGTTCTTCCCCCAAAACCCTACCTGTTATTCACCAGATCATCAATTCCGGTTCCGCTTCCGCTCCTGTTCCCAGTACTCCGCCGTCACCTTCCATGCGTTCAACTGGATCCGCCGGTTTCATGATTCCTTCTCCTAAGGAACCGTTCGGTAAGATCGAGATGTATTCGCCGGCTTTCTATGCTGCTTGTACTGCTGGTGGAATTCTTAGCTGTGGTCTTACTCATATGAGTGTTACTCCTCTTGACTTAGTCAAGTGTAATATGCAGATTGACCCTGCAAAGTACAAGAGTATCTCATCAGGTTTTGGAGTTTTGCTCAAGGAGCAGGGAGTTAAGGGCTTTTTCCGTGGATGGGTGCCAACCTTGCTTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCAGCAAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGACATTGCACTTTGCCCATTTGAGGCTGTTAAGGTCCGTGTCCAAACTCAGCCTGGTTTCGCAAGAGGTTTGGGTGATGGGCTCCCAAAATTTGTCAAGTCTGAAGGAGCTTTGGGGCTGTACAAGGGATTAGTGCCTCTATGGGGACGTCAAATTCCATACACAATGATGAAATTTGCCTCTTTTGAGACCATTGTTGAGCAGATCTATAAGCATGCCATCCCCACACCAAAGAATGAGTGCAGCAAAGGCCTGCAACTTGGTGTCAGTTTTGCTGGTGGATACATTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAACGCCAAAGGTGCAACAGTTGGTGATGCTGTTAAGAAGTTTGGTGTTGTTGGTCTTTTCACCCGTGGTCTCCCCCTCCGTATTGTTATGATTGGAACACTTACCGGAGCCCAGTGGGGAATATATGATGCTTTCAAAGTCTTTGTGGGGCTGCCAACCACTGGTGGTGCTGCTCCTGCTCCTGTTGCTGTTCCTGCCGAGATTGAAAGTGCATAA 1134 0.4656 MTNSSESSSRRTMIPSFLYGSSPKTLPVIHQIINSGSASAPVPSTPPSPSMRSTGSAGFMIPSPKEPFGKIEMYSPAFYAACTAGGILSCGLTHMSVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEQIYKHAIPTPKNECSKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKFGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPAPVAVPAEIESA* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1021 377 Pfam Mitochondrial carrier protein 80 163 IPR018108 -
Tpr6g1021 377 Pfam Mitochondrial carrier protein 178 262 IPR018108 -
Tpr6g1021 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 275 354 IPR018108 -
Tpr6g1021 377 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 5 370 - -
Tpr6g1021 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 161 IPR018108 -
Tpr6g1021 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 258 IPR018108 -
Tpr6g1021 377 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 5 370 IPR044677 GO:0005315|GO:1990547
Tpr6g1021 377 SUPERFAMILY Mitochondrial carrier 80 350 IPR023395 -
Tpr6g1021 377 Gene3D Mitochondrial carrier domain 77 355 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1021 Tpr-Chr6 9422497 9426079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1021 7 376 Chloroplast and Mitochondria Gene Families AT5G14040 78.933 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1021 K15102 - gmx:548006 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1021 6 9422497 9426079 Tpr2g0049 2 632102 636600 PCT