Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1010 ATGGCTGGGGAATCAAGAAAATGGGTGGTGCTAATAGCAACAATTTGGATACAAGCATTCACTGGAACAAATTTTGATTTTTCATCATATTCATCTGAGCTGAAATCAGTTCTTGATATAACTCAACTTCAGCTGAATTATCTTTCAGTTGCATCAGATATGGGGAAGGCATTTGGTTGGTGTTGTGGTGTTTCACTCATGTATTTTCCATTATGGGTGGTTTTGTTCATGGCTGCTTTCATGGGGATTCTTGGTTATGGCCTCCAATGGCTTGTCATTCAAAGACTCATCACTTTGCCTTATTTTCTGGTATTTTTTCTATGCTTGATTGCAGGCTGCAGCATCTGCTGGTTCAACACCATCTGCTATATATTATGTATAAAAAATTTCACATCTAACCGTTCACTTGCGTTATCTTTAAGCATTAGTTTCAATGGTGTAAGTGCAGCTTTATACACTCTCATTGCAAATGCAATAATCTCAAACAATGACACTCTCTATCTCTTCCTCAATGCCATTGTTCCTCTCCTCATTTCAGCATTAGTACTCATTCCAATTCTCCAACAACCACAACCTCAGCAACAACATTCCGCTGACACACTTCATCGTAGCGATCATGATTCCTTAATTTTTCTTTGCCTCAACATCCTTGCCCTTGTCACAGGTCTCTACCTTCTCTGCCTATATTCTCTTTCGTCGTCCCCAACTGTAGCTCGTGTTATCCTTGTCGGCGCAATTTTTCTCTTATCAATGCTTTTATTTTTGCCAAGCATTGTGTATTCAAAACAATGGTCTTGTTTTACTCTTCCGACAAGCTTTTCGTTATATGAATCAAGTTTCGCTGTTATTGAAAATAATGATGATAATCATGAGCTTGACAAGGAACTAATTAGTATAGAGGATCATGATGCAAGGGATAATGTAAGTGATCAAAGCATGACGATTGAGAAGAGTTTATGTTTTGTGAATGTGTTGGAGAAAGAGAAGATTATAATGCTTGGTGAAGAGCATACAACTAAGATGTTGATTCGTAGGTGGGATTTTTGGTTATATTTCATTGCTTATTTCTGTGGTGGAACAATTGGATTGGTTTATAGTAATAATTTGGGCCAAATATCTCAATCACTAGGACATAATTCTTTGACAAGTTCTCTTGTGACACTTTACTCCACATGTTCCTTTTTTGGTCGACTTCTTGCAGCTGCACCTGATTTACTCAGCAGCAAGATACACTTTGCAAGAACTGGATGGTTTGCAGCAGCATTGATACCAACACCAATTGCATTCATTTTGCTAGCCATATCCGGCACCAAAACCGCATTGCAATTAGGCACAAGCTTAATTGGATTAAGTTCCGGCTTTGTATTTTCTGCAGCAGTATCTATAACATCAGAACTATTTGGTCCAAACAGTGTAGGGGTAAACCACAATATCCTCATCACAAACATTCCAATAGGGTCATGTCTTTATGGCCTTCTTGCTGCATTGGTTTATGACTCTAATGCCAAAAGCTCAAGACAATCAATATGGCTTCGCGAGATGTCGTTGTGTATGGGAAGGAAATGCTATATGCAGACATTTATATGGTGGAGTTGCATTTCAATTGTTGGATTAGTTTCAAGCTTCTTGCTTTTCTTAAGGACTAAGCAAGCTTATGATAGTTTTGAAAGAAATAAAAATCAAAATAGAAGCAAATTAGCTTTTGATACAGAACTGTTCTGA 1722 0.378 MAGESRKWVVLIATIWIQAFTGTNFDFSSYSSELKSVLDITQLQLNYLSVASDMGKAFGWCCGVSLMYFPLWVVLFMAAFMGILGYGLQWLVIQRLITLPYFLVFFLCLIAGCSICWFNTICYILCIKNFTSNRSLALSLSISFNGVSAALYTLIANAIISNNDTLYLFLNAIVPLLISALVLIPILQQPQPQQQHSADTLHRSDHDSLIFLCLNILALVTGLYLLCLYSLSSSPTVARVILVGAIFLLSMLLFLPSIVYSKQWSCFTLPTSFSLYESSFAVIENNDDNHELDKELISIEDHDARDNVSDQSMTIEKSLCFVNVLEKEKIIMLGEEHTTKMLIRRWDFWLYFIAYFCGGTIGLVYSNNLGQISQSLGHNSLTSSLVTLYSTCSFFGRLLAAAPDLLSSKIHFARTGWFAAALIPTPIAFILLAISGTKTALQLGTSLIGLSSGFVFSAAVSITSELFGPNSVGVNHNILITNIPIGSCLYGLLAALVYDSNAKSSRQSIWLREMSLCMGRKCYMQTFIWWSCISIVGLVSSFLLFLRTKQAYDSFERNKNQNRSKLAFDTELF* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1010 573 Gene3D MFS general substrate transporter like domains 340 556 IPR036259 -
Tpr6g1010 573 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 560 - -
Tpr6g1010 573 SUPERFAMILY MFS general substrate transporter 218 550 IPR036259 -
Tpr6g1010 573 SUPERFAMILY MFS general substrate transporter 6 193 IPR036259 -
Tpr6g1010 573 Pfam Nodulin-like 7 259 IPR010658 -
Tpr6g1010 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1010 Tpr-Chr6 9307635 9311897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1010 1 559 Nodulin-like Gene Family AT1G31470 54.107 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1010 - - mtr:MTR_7g083660 953.355