Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr6g0990 | ATGGCAGATGATTCTTCATCCATTTATGAGTATTTTAAGCAGCAGCAACAACAACAACAACTGCAACAACAGCAACCATCTTCATCAACAAGAAGTGGTGGAAGAAGATCTTCATCTTCAACAGCAAAAACTTTTCAATGTCTTTTTTGTTATAGAAAGTTCTACACTTCTCAAGCTCTTGGTGGTCATCAAAATGCTCATAAGCTTGAAAGAGCTGCTGCAAAAACAAGAACCATTAACCTTAACAACTACACCACCACCACCACCAACAACAACAACAACAACGTTGGTACTGTCTCTTTCTCTTCACCACAACCACAACAGTCACCACCTTCATTTTCTTTCATGAATGAACCAGAAAACTTAACTACTATGTCTCATCAACAACTTGAACCGTTTCATCCTCAATATGAATACCCTTATTGGCAAAACCTTGAAATGGAACAGTTTCATCAAACTCAACATCCTCAGTTTCATCAAAATCAACAGTACCATGTTACAACAAACACTTTTCCTATGGATCCTTTCAATGGTTCTTCTTCTGCTTCATACTACACTCATCCTGATGAGCAACATGTTTTCTACAACAATGCTACTGATGATGTTGCTGCTGCTGGTTCTCCATCTCATGATGCTTCTGAAAATGTGAATCTTGACCTCACACTTCACTTGTGA | 675 | 0.3822 | MADDSSSIYEYFKQQQQQQQLQQQQPSSSTRSGGRRSSSSTAKTFQCLFCYRKFYTSQALGGHQNAHKLERAAAKTRTINLNNYTTTTTNNNNNNVGTVSFSSPQPQQSPPSFSFMNEPENLTTMSHQQLEPFHPQYEYPYWQNLEMEQFHQTQHPQFHQNQQYHVTTNTFPMDPFNGSSSASYYTHPDEQHVFYNNATDDVAAAGSPSHDASENVNLDLTLHL* | 225 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr6g0990 | 224 | PANTHER | ZINC FINGER PROTEIN JAGGED | 21 | 224 | IPR045320 | GO:0003700 | |
Tpr6g0990 | 224 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 45 | 72 | IPR013087 | - | |
Tpr6g0990 | 224 | PANTHER | ZINC FINGER PROTEIN KNUCKLES | 21 | 224 | - | - | |
Tpr6g0990 | 224 | SUPERFAMILY | beta-beta-alpha zinc fingers | 42 | 72 | IPR036236 | - | |
Tpr6g0990 | 224 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Tpr6g0990 | 224 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 47 | 67 | IPR013087 | - | |
Tpr6g0990 | 224 | Gene3D | Classic Zinc Finger | 32 | 99 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr6g0990 | Tpr-Chr6 | 8996892 | 8997566 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr6g0990 | 43 | 141 | C2H2 Transcription Factor Family | AT5G14010 | 45.714 | 2.21e-14 | 66.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr6g0990 | - | - | mtr:MTR_7g083210 | 117.472 |