Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0968 ATGGCCTTACAGAACATTGGTGCTGGCAACAGCGATGATGCCTTCTACAGGTATAAGATGCCTAGAATGATTACCAAAATTGAGGGCAGAGGCAATGGCATCAAAACAAATATTGTCAATATGGTTGATATTGCAAAAGCTTTAGCAAGGCCAGCTGCTTACACAACAAAGTATTTTGGTTGTGAACTTGGAGCACAGTCAAAATTTGATGAGAAAACTGGGACTTCTCATGTCAACGGAGCACACGACACTGCAAAACTTGCTGGTCTTCTTGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCATAATTACCAAGAATCAAATGATCCAGATGAAATGTGCTGCTTGTGGTTTTGTGTCTGACGTGGATATGAGAGACAAGCTTACTACTTTCATCATTAAGAACCCACCAGAAACAAAGAAAGGTTCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAGGCAGGCGAAGCAGCTGATGAGGAGCTGAAAAAACTGAAGAAAGAGGTCGTCAAGAAGAAAGTAACTTCTAAGGAAGGCACCACAAAATCAAGCTCTTCAAGGAAGAAAGAAAATGGCTCCGATGAAGATCATTCTTCTCCTACTCGAAGTCCAACTGATGAGAAGGACGATGCTGAAGATGAAGATGATGTTGAATGGCAAACAGACACATCACTGGAGGCTGCTCGTCAACGAATCCAAGAACAGTTAAGTGCTGTGACGGCTGATATGGTCATGCTCTCCACAACTGAACCTGAACCAGAGAAGGAGAAAGCAGCCACTAAGGTAAGTGATAATCCTGGTAATGGTAACTCCATGAACTACAAGACTCTGGTTGGTGAACTCAAAGCTGATTTGAAGAATGGTGCTTCGGCCAAGGAATTGGTGACCCATTGGGCTTCACTTCCTGTCTCTCCACAAGAAAAGATGAGTGCTCTGTACGAAGCCCTATTTGGGGACATTGAGAAAGGGTTTGCAAAAGAAGCCATCAAGAAGAAGAACTACCTTGCTGCTGCAGTTGCTGAGGAAGAGGCTATGCCGCTGCTGTTGCTGCGTGCAATTGAGGAATTTTCTTTGAAATCCACTTCCTCTGCACTCAAGGAGGTTGCCCTGGTTCTGAAGGCACTTTACGATGCTGATGCGTTGGAGGAAGAGCACATATTGCAGTGGTATCAAGAAGGGCTGAAAAGCGATAACAAGAACTCTCAGATTTGGAAGAACGTTAAACCCTTCATTGAGTGGCTTCAGAGTGCAGAATCAGAGTCCGAGGAAGAGTAA 1320 0.4402 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQMKCAACGFVSDVDMRDKLTTFIIKNPPETKKGSKDKKAMRRAEKERLKAGEAADEELKKLKKEVVKKKVTSKEGTTKSSSSRKKENGSDEDHSSPTRSPTDEKDDAEDEDDVEWQTDTSLEAARQRIQEQLSAVTADMVMLSTTEPEPEKEKAATKVSDNPGNGNSMNYKTLVGELKADLKNGASAKELVTHWASLPVSPQEKMSALYEALFGDIEKGFAKEAIKKKNYLAAAVAEEEAMPLLLLRAIEEFSLKSTSSALKEVALVLKALYDADALEEEHILQWYQEGLKSDNKNSQIWKNVKPFIEWLQSAESESEEE* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0968 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 439 - -
Tpr6g0968 439 Gene3D - 3 104 - -
Tpr6g0968 439 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Tpr6g0968 439 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Tpr6g0968 439 CDD W2_eIF5 288 432 - -
Tpr6g0968 439 SUPERFAMILY ARM repeat 288 433 IPR016024 -
Tpr6g0968 439 Pfam eIF4-gamma/eIF5/eIF2-epsilon 364 439 IPR003307 GO:0005515
Tpr6g0968 439 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Tpr6g0968 439 Gene3D - 105 145 - -
Tpr6g0968 439 MobiDBLite consensus disorder prediction 185 222 - -
Tpr6g0968 439 MobiDBLite consensus disorder prediction 148 170 - -
Tpr6g0968 439 SMART 542_3 347 435 IPR003307 GO:0005515
Tpr6g0968 439 ProSiteProfiles W2 domain profile. 279 439 IPR003307 GO:0005515
Tpr6g0968 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 439 IPR045196 GO:0003743|GO:0006413
Tpr6g0968 439 MobiDBLite consensus disorder prediction 185 234 - -
Tpr6g0968 439 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Tpr6g0968 439 MobiDBLite consensus disorder prediction 143 170 - -
Tpr6g0968 439 Gene3D - 283 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0968 Tpr-Chr6 8565238 8568185 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0968 1 432 Eukaryotic Initiation Factors Gene Family AT1G36730 65.247 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0968 K03262 - gmx:100796346 633.639