Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0964 ATGCTTCCTTTCTTCAACCAATCTATGGAACTCGTTCCGAATCCCATCAGAACTCGAAACAATCTCTCTCCGACACTCGGAGAACTCCTCAAACGCGTCGAAGATGCTCAAAACGACAAAAATATTGCCGATCAACCTCACCATACTCTCGACGTTTCTTCCTCCTCCTCTTCCACCACCCTTCCCCCATCTTTCTTCCTTTCTTTCACCAACTTAACATACAGCGTCAAGCTACAAAAGAAGTTTTCTTGCTTTTCCTCAAAAGAAAATTCTCTTCCAAATGATCCAGAAGCCGAAACAAAACAAAATGGTATGAAGATTCTCCTCAATGACATATCTGGTGAAGCCAGGGACGGAGAGATCATGGCAGTTCTCGGCGCAAGTGGCTCCGGCAAGTCAACACTAATCGACGCTTTGGCTGATAGAATCTCCAAAGATTCTCTCAGAGGCACTGTGACACTAAACGGCGAGGTTTTGGAGTCAAGTCTTCAGAAGGTGATTTCAGCTTATGTTATGCAAGATGATCTTCTCTTCCCCATGCTTACGGTGGAAGAAACTCTCATGTTCTCCGCCGAGTTTCGCCTCCCTCGCTCCCTCTCAAAATCAAAGAAAAAGGCTCGTGTCCAAGCATTAATCGATCAACTCGGTCTCCAAAGGGCCGCCAACACCGTCATCGGAGACGAAGGTCACCGAGGTGTTTCCGGTGGAGAACGTCGCCGTGTTTCAATAGGAACAGACATCATTCACGATCCAATCATTTTATTCTTAGATGAACCAACCTCCGGATTGGACTCCACCAGTGCTTACTTGGTGGTGAAGGTTTTGCAGCGAATTGCTCAGAGCGGTAGCATCGTGATGATGTCCGTTCATCAACCAAGTTACAGAATCCTCGGTTTGTTAGACCGTGTGATCTTCCTCTCCCACGGTCAAACCGTCTACAGCGGTTCTCCGGTGAACCTCCCTAATTTCTTCTCCGAATTCGGCCATCCCATACCGGAAAACGAAAACCGAACAGAATTCGCATTAGATCTGATCCGTGAACTTGAAGGAACTTCCGGAGGAACCAAAAGTCTCGTCGAGTTCAACAAATCATGGCAGTTAAAAAATCAACCACCGTCTGCAACCATCGTTAATAATAACGGACCTAGACTGTCCGTAAAAGACGCCATCAGCGCAAGTATCTCAAGAGGGAAATTAGTTTCAGGAACTAACGGAGGAAACGGAAACACAACTGCATCGTTAGTTGCCACGTTTGCAAATCCATTTTGGATTGAAATCGCGGTTATTGGAAAAAGATCTCTAACAAACTCAAGGCGGATGCCCGAATTATTCGGTATCCGTCTCGGTGCAGTTATGGTCACCGGAGTAATCTTAGCCACCATGTTCTACCATCTTGACAATTCACCAAAAGGTGTTCAAGAGAGATTAGGATTCTTCGCATTCGCCATGTCAACAACCTTCTACACTTGTGCTGAAGCAATTCCAGTATTCCTTCAAGAGCGTTACATCTTCATGAGAGAAACTGCTTACAATGCTTACCGTCGATCTTCCTATGTCCTTGCTCATTCCATCGTCGCCCTCCCTGCACTCATCTTCCTCTCTTTCGCCTTCGCCGTCACAACTTTCTGGTCAGTCGGACTCGCTGGCGGCTCATCTGGTTTTCTCTTTTACTTTTTAACTATCCTAGCTTCCTTCTGGGCCGGTAGTTCGTTCGTGACGTTTCTCTCCGGTGTGGTTTCTAATGTGATGCTTGGTTTCACTGTTGTGGTTGCAATTTTAGCTTACTTTCTTCTCTTCAGTGGATTCTTCATCAGTAGGGATAGAATTCCACCCTACTGGATATGGTTCCATTATTTATCACTAGTTAAGTATCCTTTTGAAGGAGTGCTTCAGAATGAATTTGATATTAAGCCGCCCAGGTGTTTTGTGAGAGGAATTCAGATGTTCGATAACACGCCGCTAGGCGATGTGCCGAGGAGTCTGAAGGTGGAGCTGTTGAAGAGTATGAGTAAGACATTGGGGATTGACATAACTAGCTCTACTTGTGTTGTTACTGGAGCTGATATATTGAAGCAGCAGGGGGTTACAGATCTTAGCAAATGGAACTGCTTGTTCATTACCATTGCTTGGGGTTTCTTCTTTCGTTTCCTGTTTTACTTGGCGCTGCTATTTGGAAGCAAGAACAAAAGGAAATAA 2196 0.454 MLPFFNQSMELVPNPIRTRNNLSPTLGELLKRVEDAQNDKNIADQPHHTLDVSSSSSSTTLPPSFFLSFTNLTYSVKLQKKFSCFSSKENSLPNDPEAETKQNGMKILLNDISGEARDGEIMAVLGASGSGKSTLIDALADRISKDSLRGTVTLNGEVLESSLQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKARVQALIDQLGLQRAANTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYLVVKVLQRIAQSGSIVMMSVHQPSYRILGLLDRVIFLSHGQTVYSGSPVNLPNFFSEFGHPIPENENRTEFALDLIRELEGTSGGTKSLVEFNKSWQLKNQPPSATIVNNNGPRLSVKDAISASISRGKLVSGTNGGNGNTTASLVATFANPFWIEIAVIGKRSLTNSRRMPELFGIRLGAVMVTGVILATMFYHLDNSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIVALPALIFLSFAFAVTTFWSVGLAGGSSGFLFYFLTILASFWAGSSFVTFLSGVVSNVMLGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPFEGVLQNEFDIKPPRCFVRGIQMFDNTPLGDVPRSLKVELLKSMSKTLGIDITSSTCVVTGADILKQQGVTDLSKWNCLFITIAWGFFFRFLFYLALLFGSKNKRK* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0964 731 SMART AAA_5 118 346 IPR003593 -
Tpr6g0964 731 ProSitePatterns ABC transporters family signature. 233 247 IPR017871 GO:0005524
Tpr6g0964 731 Pfam ABC-2 type transporter 290 370 IPR043926 GO:0140359
Tpr6g0964 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 23 724 - -
Tpr6g0964 731 Pfam ABC transporter 109 261 IPR003439 GO:0005524
Tpr6g0964 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 67 333 IPR003439 GO:0005524
Tpr6g0964 731 Pfam ABC-2 type transporter 426 634 IPR013525 GO:0016020|GO:0140359
Tpr6g0964 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 325 IPR027417 -
Tpr6g0964 731 Gene3D - 98 324 IPR027417 -
Tpr6g0964 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0964 Tpr-Chr6 8492170 8494695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0964 91 293 Calmodulin-binding Proteins AT2G36910 28.641 7.45e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0964 K05681 - gmx:100781319 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0964 6 8492170 8494695 Tpr6g0964 6 8492170 8494695 ECH