Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0963 ATGGGGAAAGGAGGTGAAAATTACGGGAGAAAAGAGGACACGAGTTCTGGTAATGATAATTCAGACGCTGAAATTTTCAAAGCGTGGGCGAAGGATGTGCGTGAATGCGAAGAACACTTTAAGGTGAGTGTGAAATCAGGGTTGAGTAATGAAGAGGTTGAGAATCGGCGTAAGATCTATGGTTTGAATGAATTGGAGAAACACGATGGTCAATCGATTTGGAAATTGGTTTTGGAACAGTTTAACGATACTTTGGTTCGGATTCTTCTCGCTGCGGCTATAATTTCGTTTGTTTTGGCTTGGTATGATGGCGAAGAAGGTGGCGAGATGGAGATTACGGCTTTTGTTGAGCCTCTGGTGATATTTTTGATATTGATTGTGAACGCGATTGTTGGTGTTTGGCAAGAGAGTAATGCGGAGAAAGCATTGGAGGCTTTGAAGGAGATTCAATCGGAGCATGCTTCGGTGATTCGGAATGGCGAGAAAATTCCTAGCTTACCTGCTAAGGATCTTGTTCCTGGTGATATTGTGGAGCTTAAGGTTGGTGATAAGGTTCCTGCGGATATGCGAGTTGTGGAATTGATAAGTTCTACTTTGAGATTGGAGCAGGGTTCCTTGACTGGTGAGAGTGAAGCGGTGAATAAGACTAATAAGCCTGTTGCTGAGGATTCTGATATTCAAGGCAAAAGGTGTATTGTTTTCGCTGGGACGACTGTTGTTAATGGTCATTGCTTTTGCCTTGTTACTCAGACTGGTATGGAGACTGAGATTGGGAAGGTGCATAACCAGATACAGGAGGCGTCGCAGAGTGAGGAAGATACTCCTTTGAAGAAGAAGCTTAATGAATTCGGAGAGAGGCTGACAATGATGATTGGACTCATTTGTATTTTGGTTTGGCTCATCAATGTTAAGTATTTCCTTACATGGGAGTATGTTAATGGATGGCCTGCGAACTTCAAGTTTTCGTTTGAGAAGTGTACTTATTACTTTGAGATTGCTGTGGCATTGGCCGTGGCTGCTATTCCCGAGGGATTGCCTGCGGTCATCACTACTTGCCTTGCACTCGGTACTCGCAAGATGGCCCAGAAGAATGCCCTAGTTCGGAAGCTACCAAGTGTTGAAACTTTGGGTTGTACAACTGTTATTTGTTCTGATAAAACTGGTACATTGACTACAAACCAGATGGCTGTTTCGAAACTAGTAGCTATTGGCCCTAATGTAGATGCACTGAGAGCTTTTAAGGTGGAAGGAACTACCTATAATCCAAATGATGGTCAAATAGAGAATTGGCCAGCTGGTCGATTGGATGCCAATCTTCATATGATAGCAAAAATAGCTGCTGTTTGTAATGATGCTGGAGTGTCACAGTCAGAGCATAAGTTTGTTGCCCATGGAATGCCTACTGAAGCAGCTTTGAAGGTGTTGGTAGAGAAGATGGGCCTTCCTGAAGGATCCAAGGATGTGCAATCAGGAAGCAAAAGTACCATATTGCGTTGTTGTGAATGGTGGAATGAACATGACCGGCGGATTGCTACTCTTGAGTTTGACCGTGACAGGAAGTCAATGGGTGTTATTGTAGACTCTGGTGCGGGGAGAAAGTCGCTTCTGGTTAAGGGTGCTGTTGAAAATGTGTTGGATAGAAGCTCTAAAGTTCAGTTGCGTGATGGTTCAATTGTGAAACTGGACAACAATGCTAAGAACCTCATATTGCAAGCTCTTCATGAAATGTCCACCAGTGCATTACGCTGTTTGGGATTTGCCTACAAGGATGAGCTAACTAATTTTGAAGGCTACAATGGTAACGACGATCATCCAGCCCACCAGCTTTTGCTTGACCCTTCCAATTATTCATCAATTGAAAATGAACTCATTTTTGTCGGCTTGGTTGGGTTGAGGGATCCTCCTAGGGAGGAGGTATACCAAGCAATAGAAGACTGCAGAGCAGCTGGAATTCGTGTTATGGTTATAACCGGAGACAACAAAAACACTGCTGAAGCTATATGTCGGGAAATAGGTGTATTTGCACCCAATGAAGACATTAGTTCAAAAAGTGTAACTGGTAGAGATTTTATGGAACTCCGTGATAAAAAAGCTTATCTGAGACAGAGTGGTGGGCTTTTGTTTTCGAGGGCTGAACCAAGACACAAGCAGGACATTGTGAGGCTTCTTAAAGAAGATGGGGAGGTTGTTGCTATGACTGGAGATGGTGTCAATGATGCACCCGCCTTAAAGCTTGCAGACATTGGTATTGCAATGGGCATTGCAGGGACAGAGGTGGCCAAGGAAGCTTCAGATATGGTGTTAGCAGACGATAATTTTAGTTCAATTGTGGCTGCTGTTGGGGAAGGTAGATCTATCTACAATAACATGAAGGCTTTTATCAGGTACATGATCTCTTCCAATATTGGCGAGGTTGCATCTATATTTCTTACAGCTGCACTAGGAATTCCTGAAGGACTGATACCTGTCCAGCTTCTGTGGGTCAATCTCGTCACTGATGGACCTCCTGCAACAGCTTTGGGATTTAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCACTAATTAACTTGTGGATTTTATTCCGCTATCTGGTTATTGGGATTTATGTTGGATTAGCTACTGTTGGTGTCTTCATTATATGGTATACACATGGTTCCTTTTTGGGAATTGACCTCAGCGGAGATGGACATACTCTTGTGACTTACTCCCAGCTTGCCAACTGGGGTCAATGCTCCACTTGGAATAACTTCACTGCTGCTCCCTTCACCGCTGGTTCTAGAGTCATATCTTTTGATGCTGACCCATGCGACTACTTCCACACTGGTAAAGTGAAAGCCATGACATTGTCCCTCTCTGTGTTGGTAGCCATTGAAATGTTCAACTCTCTCAATGCCCTGTCTGAAGATGGAAGTCTTTTGACAATGCCCCCATGGGTGAACCCTTGGCTTCTTTTGGCAATGTCCATTTCATTTGGGCTGCACTTTTTGATCTTGTATGTGCCATTCTTAGCACAAGTATTTGGCATCGTACCGTTGAGCGTCAACGAGTGGCTTTTGGTTTTGGCGGTTGCATTGCCTGTCATTCTAATTGACGAGATTTTGAAATTCATTGGGAGATGTACAAGTGGGTCTGCAAGAAGCTCAAAGCAAAAAACAGAGTAG 3183 0.4373 MGKGGENYGRKEDTSSGNDNSDAEIFKAWAKDVRECEEHFKVSVKSGLSNEEVENRRKIYGLNELEKHDGQSIWKLVLEQFNDTLVRILLAAAIISFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHASVIRNGEKIPSLPAKDLVPGDIVELKVGDKVPADMRVVELISSTLRLEQGSLTGESEAVNKTNKPVAEDSDIQGKRCIVFAGTTVVNGHCFCLVTQTGMETEIGKVHNQIQEASQSEEDTPLKKKLNEFGERLTMMIGLICILVWLINVKYFLTWEYVNGWPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAIGPNVDALRAFKVEGTTYNPNDGQIENWPAGRLDANLHMIAKIAAVCNDAGVSQSEHKFVAHGMPTEAALKVLVEKMGLPEGSKDVQSGSKSTILRCCEWWNEHDRRIATLEFDRDRKSMGVIVDSGAGRKSLLVKGAVENVLDRSSKVQLRDGSIVKLDNNAKNLILQALHEMSTSALRCLGFAYKDELTNFEGYNGNDDHPAHQLLLDPSNYSSIENELIFVGLVGLRDPPREEVYQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFAPNEDISSKSVTGRDFMELRDKKAYLRQSGGLLFSRAEPRHKQDIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINLWILFRYLVIGIYVGLATVGVFIIWYTHGSFLGIDLSGDGHTLVTYSQLANWGQCSTWNNFTAAPFTAGSRVISFDADPCDYFHTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSISFGLHFLILYVPFLAQVFGIVPLSVNEWLLVLAVALPVILIDEILKFIGRCTSGSARSSKQKTE* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0963 1060 Pfam E1-E2 ATPase 149 363 - -
Tpr6g0963 1060 SUPERFAMILY Calcium ATPase, transduction domain A 152 263 IPR008250 -
Tpr6g0963 1060 Pfam Cation transporter/ATPase, N-terminus 29 96 IPR004014 -
Tpr6g0963 1060 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 322 404 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0963 1060 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 120 310 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0963 1060 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 707 814 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g0963 1060 SFLD Haloacid Dehalogenase 364 785 - -
Tpr6g0963 1060 MobiDBLite consensus disorder prediction 1 20 - -
Tpr6g0963 1060 Pfam Cation transporting ATPase, C-terminus 818 1044 IPR006068 -
Tpr6g0963 1060 SMART Cation_ATPase_N_a_2 27 101 IPR004014 -
Tpr6g0963 1060 SFLD p-type atpase 364 785 IPR044492 -
Tpr6g0963 1060 Pfam haloacid dehalogenase-like hydrolase 380 747 - -
Tpr6g0963 1060 Gene3D - 47 265 - -
Tpr6g0963 1060 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 6 1058 - -
Tpr6g0963 1060 MobiDBLite consensus disorder prediction 1 18 - -
Tpr6g0963 1060 Gene3D - 380 778 IPR023214 -
Tpr6g0963 1060 Coils Coil 139 159 - -
Tpr6g0963 1060 Gene3D - 79 1046 - -
Tpr6g0963 1060 SUPERFAMILY Calcium ATPase, transmembrane domain M 27 1047 IPR023298 -
Tpr6g0963 1060 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 390 631 IPR023299 GO:0000166
Tpr6g0963 1060 PRINTS P-type cation-transporting ATPase superfamily signature 202 216 - -
Tpr6g0963 1060 PRINTS P-type cation-transporting ATPase superfamily signature 383 397 - -
Tpr6g0963 1060 PRINTS P-type cation-transporting ATPase superfamily signature 627 638 - -
Tpr6g0963 1060 PRINTS P-type cation-transporting ATPase superfamily signature 649 659 - -
Tpr6g0963 1060 PRINTS P-type cation-transporting ATPase superfamily signature 733 752 - -
Tpr6g0963 1060 PRINTS P-type cation-transporting ATPase superfamily signature 757 769 - -
Tpr6g0963 1060 SUPERFAMILY HAD-like 381 837 IPR036412 -
Tpr6g0963 1060 ProSitePatterns E1-E2 ATPases phosphorylation site. 385 391 IPR018303 -
Tpr6g0963 1060 Gene3D - 393 634 IPR023299 GO:0000166
Tpr6g0963 1060 PANTHER CALCIUM-TRANSPORTING ATPASE 6 1058 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0963 Tpr-Chr6 8476591 8484248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0963 1 1060 Primary Pumps ATPases(2) AT1G07670 79.155 0.0 1738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0963 K01537 - gmx:100788807 1900.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0963 6 8476591 8484248 Tpr6g0963 6 8476591 8484248 ECH