Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0955 ATGGATATTGAAGAAGTAGAAAGAGTAGTTGTTGCCAAACCAGTTGCTTCAAGACCAAAATGTTCTACTTACAAATCTTTCTCAGAGCTTCTAGTAGGTGCAATCAATGACACTCCTCCAATTGCATCTTCTCAAACTACAATTTCTGCCATTAGACCAAAAACAGTGAGGTTCAAGCCAACATTGAATCCCTCCCATGCTGGTTCTATTTCTTCTCAGTCTGACATGGATCCCAAACCTGACGCCAATCAGTCTCTCATTTACAAGCCAACGGCAAAATTTGTGTCAAAGACAACCGTCTCTCTATTGGCAAACATGGGAATTTGCAGTACTAATCAGCAACAATCACAGCAATCAGTGGACACCAATCTTCAACATTTAAACCATGACAAATTTAGATCCAATTTGAGCTCAAATTTTCATCAGAACATTACCATTCCAAAAGAAACATACCAGCAGGTCACTGAACCTTGTAAGACGGCACAGCAGAACATGGAAGAGGATCAAAAAGCTCTAACACCATCCACAATGAATGTTGATAAACCTTCTTATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTATTACAAGTGCACACATCCTAACTGTCCAGTTAAAAAGAAAGTTGAAAGATCATTTGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAATCATGGAAAGCCGCAACTTCAAAAGCGTAACGCGGGAGCGTCACAAGGATCAGGAATGGTTTCTGATGGATTGGTTCAAGATATATTGAATAATAATCAGAATGAAAGGATTGAAGGAAGAATGGAGAATGATGTCAAAGCTTCACAGCCTAATGATTCTGGTCTAGAAAATTCATGCGGTCTAAGTGGGGAATGTGTGGAAGGAAGCAAAGGATTTGAAGCAGAAGAAGATGATCCTAGAAGTAAAAGAAGGAAAAATGAGAATCAATCCAATGAAGGGGCAGTATCAGAGGAAGGTTTAGTAGAGCCGCGCATTGTGATGCAAAATTCTGTGGATTCTGAAATCCTTGGAGACGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTAATATCAAGTGTAACGTTCGCAAACATGTGGAAAGAGCAATAGATGATCCAAAATCATTTGTGACTACATATGAAGGAAAACACAACCATGAGATGCCACTCAAGAACACAACAACAACTTTGTCTTCTGAAAAAGATTCACAGGCTTCATAA 1296 0.3935 MDIEEVERVVVAKPVASRPKCSTYKSFSELLVGAINDTPPIASSQTTISAIRPKTVRFKPTLNPSHAGSISSQSDMDPKPDANQSLIYKPTAKFVSKTTVSLLANMGICSTNQQQSQQSVDTNLQHLNHDKFRSNLSSNFHQNITIPKETYQQVTEPCKTAQQNMEEDQKALTPSTMNVDKPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGEIAEIVYKGEHNHGKPQLQKRNAGASQGSGMVSDGLVQDILNNNQNERIEGRMENDVKASQPNDSGLENSCGLSGECVEGSKGFEAEEDDPRSKRRKNENQSNEGAVSEEGLVEPRIVMQNSVDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERAIDDPKSFVTTYEGKHNHEMPLKNTTTTLSSEKDSQAS* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0955 431 SUPERFAMILY WRKY DNA-binding domain 348 414 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 PANTHER WRKY TRANSCRIPTION FACTOR 44 7 417 - -
Tpr6g0955 431 SMART WRKY_cls 354 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 SMART WRKY_cls 183 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 MobiDBLite consensus disorder prediction 62 79 - -
Tpr6g0955 431 ProSiteProfiles WRKY domain profile. 349 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 MobiDBLite consensus disorder prediction 408 431 - -
Tpr6g0955 431 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 417 IPR044810 GO:0003700
Tpr6g0955 431 MobiDBLite consensus disorder prediction 55 79 - -
Tpr6g0955 431 MobiDBLite consensus disorder prediction 414 431 - -
Tpr6g0955 431 Pfam WRKY DNA -binding domain 185 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 Pfam WRKY DNA -binding domain 356 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 SUPERFAMILY WRKY DNA-binding domain 181 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 MobiDBLite consensus disorder prediction 308 339 - -
Tpr6g0955 431 Gene3D WRKY domain 169 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 Gene3D WRKY domain 339 415 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 ProSiteProfiles WRKY domain profile. 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0955 431 MobiDBLite consensus disorder prediction 234 256 - -
Tpr6g0955 431 MobiDBLite consensus disorder prediction 308 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0955 Tpr-Chr6 8402929 8407130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0955 77 415 WRKY Transcription Factor Family AT2G37260 44.865 1.27e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g0955 WRKY 6.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0955 - - gmx:100794069 645.58