Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0948 ATGGAGAGTCCCATACCCTTCTTCTTCTACTCCTCTCTCGCACTCTCACTTTTTCTTCCTTTCTCCTCTTCTCAGATCATGCAAGGTTTTATAAGTTTGGATTGCGGAGGTACAGAAAGTTTCACCGATGAAATTGGTCTTGAATGGACTCCTGATAATAAGGTTAATTATGGTGAAACAAGTACTATATCGGTTGCGAATGAGACACGAAAGCAATACACGACACTACGGCACTTTCCTGCGGATTCCAGGAAATATTGCTACACGCTCGATGTTGTCAGTAGGACAAGGTACCTACTAAGGGCCAGTTTCTTGTATGGCAACTTTGACACAAACAATTTTTATCCGAAATTTGACATCTCGGTCGGTGCTACCCACTGGTCAACAATTGTTATTTCTGATGCGAATAGTATAGAAACGAGAGAGCTAATATTTTTGGCTTCAAGTTCAACTGTTAGTGTATGTTTATCAAATGCAACAACTGGGCAACCATTTATATCTACGCTTGAACTTCGACAATTCAACGGTTCAATTTATTTTACACAATATGAGCAACAGTTTTACCTTAGTGTCTCTGCAAGGATCAATTTTGGTGCGGAGAGTGATGCTCCAATCAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCTGATTCTGTGAAGAAAGCAAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAAATTTCTACCAATTTGCCAATTTTTGTTAACAGTGAAATGCCACCAATGAAAGTGATGCAGACTGCCGTAGTTGGTACAGCTGGATCTCTAACTTACCGATTAAATTTGGAAGGTTTTCCTGGCAATGCTTGGGCAGTCACTTATTTTGCAGAGATCGAAGATTTGCGTCCAAACGAGTCTAGAAAATTCAGGCTTGTGCTTCCAGGCCAGGCTGAACTTAGCAAGGCTATTGTAAATATCGAAGAAAATGCTCTAGGGAAGTATCGGCTTTATGAACCAGGATATACCAATTTAACCCTACCCTTTGTGCTTTCCTTTAAATTTGGCAAGACATCTGATTCATCCAAGGGACCTCTCGTAAATGCTATGGAGATAAATAAGTATCTTGAGAAAAATGAAGGTTCACCAGATGTTGCAGCTATTTCTGGAGTGCTTTCTCGCTACTCTTCAGCAAACTGGACACAAGAAGGAGGCGATCCATGTCTTCCTGTTCCATGGTCATGGGTCCGCTGTAGCTCAGATCCACAACCAAGTATAATTTCAATCTCGTTATCCGGTAAAAACTTGACTGGGAATATTCCTTCAGATATTACCAAATTGGTTGGTCTGGTTGAACTATGGCTTGATGGAAATATGTTGACTGGCCCAATACCAGATTTTACCGGGTGCACAGATTTAAAGATCATTCATCTCGAAAATAATCAGTTCACGGGCGTGCTCCCAGATTCTTTGGCGAATCTTCCAAGTTTGAGGGAACTATATGTTCAAAATAATATGTTATCTGGAACAGTGCCATCAAATCTTCTAAGCAAGGATTTGGTTTTTAACTACTCTGGAAACATTAACCTCCATAGAGGAAGCAAAATAAAGAGCCATATGTATATTATTATTGGTTCAGCAGTTGGTGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCTTGGTTATTCATAAAGGCAAGAGAAGATATTATGAGAAAGACCACATAGTTTCTGTCCCTACTCAAAGGCTAGCTTCTTGGAAGAGTGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTAGCTGAAATTGAAAGTGCTACAAACAACTTTGAGAAAAGAATTGGTTCTGGTGGTTTTGGAATTGTATACTATGGGAAACTGAAAGAAGGAAAAGAGATAGCAGTTAAAGTTCTAAGGAATAATTCCTATCAAGGCAAGCGCGAGTTCTCAAATGAGGTGACTCTTCTATCAAGAATACATCACAGAAACTTGGTACAACTTCTTGGATATTGCCGAGAAGAAGAGAATAGTATACTTGTGTACGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGCTCTTTAGAGAACGGACGGAGTATCAATTGGATTAAACGCCTTGAGATCGCAGAGGATGCTGCCAAAGGAATTGAATACCTTCATACAGGTTGTAATCCTGTAGTTATCCATAGAGACTTGAAAAGCAGCAATATTCTTCTTGACAGGCAGATGAAAGCCAAGGTTTCAGATTTCGGTCTTTCCAAACTTGCTGTTGATGGAGTCTCCCATGTTTCAAGCATAGTTCGCGGGACAGTAGGATACCTGGATCCTGAGTACTATATTTCCCAACAGCTAACTGACAAGAGTGATGTTTATAGCTTTGGCGTAATTCTTCTAGAACTCATATCTGGTCAAGAAGCAATATCGAATGAAAGTTTTGGTCTTCATTGTCGAAACATAGTCCAATGGGCCAAATTACACATTGAGTGTGGAGATATACAAGGCATTATTGATCCCTTGCTAGGTAACAAGTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCACATGGTGATATGCGGCCATCGATTTCAGAAGTTTTAAAGGAGATCCAAGATGCAATATCTATTGAGAGAGAAGCTGAATCATTAAGAGAAGGCAATTCTGATGAGGCGTCGCGAAATTCTTTTCATTCTTCCATGAATATAGGTTCAATGGATCTTGGTAGAGCTGAGAGTTTCCTTTCAATTGATGAATCCGTTGCACAGCCTACGGCAAGATAG 2784 0.4001 MESPIPFFFYSSLALSLFLPFSSSQIMQGFISLDCGGTESFTDEIGLEWTPDNKVNYGETSTISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRASFLYGNFDTNNFYPKFDISVGATHWSTIVISDANSIETRELIFLASSSTVSVCLSNATTGQPFISTLELRQFNGSIYFTQYEQQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTNLPIFVNSEMPPMKVMQTAVVGTAGSLTYRLNLEGFPGNAWAVTYFAEIEDLRPNESRKFRLVLPGQAELSKAIVNIEENALGKYRLYEPGYTNLTLPFVLSFKFGKTSDSSKGPLVNAMEINKYLEKNEGSPDVAAISGVLSRYSSANWTQEGGDPCLPVPWSWVRCSSDPQPSIISISLSGKNLTGNIPSDITKLVGLVELWLDGNMLTGPIPDFTGCTDLKIIHLENNQFTGVLPDSLANLPSLRELYVQNNMLSGTVPSNLLSKDLVFNYSGNINLHRGSKIKSHMYIIIGSAVGASVLLLATVISCLVIHKGKRRYYEKDHIVSVPTQRLASWKSDDPAEAAHCFSLAEIESATNNFEKRIGSGGFGIVYYGKLKEGKEIAVKVLRNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEENSILVYEFMHNGTLKEHLYGSLENGRSINWIKRLEIAEDAAKGIEYLHTGCNPVVIHRDLKSSNILLDRQMKAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGLHCRNIVQWAKLHIECGDIQGIIDPLLGNKYDLQSMWKIAEKALMCVQPHGDMRPSISEVLKEIQDAISIEREAESLREGNSDEASRNSFHSSMNIGSMDLGRAESFLSIDESVAQPTAR* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0948 927 Gene3D - 190 364 - -
Tpr6g0948 927 PANTHER OS07G0107800 PROTEIN-RELATED 13 927 - -
Tpr6g0948 927 Pfam Protein tyrosine and serine/threonine kinase 601 801 IPR001245 GO:0004672|GO:0006468
Tpr6g0948 927 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Tpr6g0948 927 SMART serkin_6 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0948 927 Gene3D Phosphorylase Kinase; domain 1 575 674 - -
Tpr6g0948 927 Gene3D Transferase(Phosphotransferase) domain 1 675 897 - -
Tpr6g0948 927 SUPERFAMILY L domain-like 400 505 - -
Tpr6g0948 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Tpr6g0948 927 PANTHER TYROSINE KINASE DOMAIN PROTEIN 13 927 - -
Tpr6g0948 927 ProSiteProfiles Protein kinase domain profile. 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0948 927 Gene3D Ribonuclease Inhibitor 375 526 IPR032675 -
Tpr6g0948 927 Pfam Malectin-like domain 33 362 IPR024788 -
Tpr6g0948 927 CDD STKc_IRAK 605 872 - -
Tpr6g0948 927 SUPERFAMILY Protein kinase-like (PK-like) 585 869 IPR011009 -
Tpr6g0948 927 Pfam Leucine rich repeat 456 496 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0948 Tpr-Chr6 8350445 8355477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0948 22 709 Receptor kinase-like Gene Family AT2G37050 67.816 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr6g0948 Malectin_like 3.8e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0948 - - gmx:100784017 1606.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0948 6 8350445 8355477 Tpr1g3987 1 44726700 44732288 PCT