Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0926 ATGGCCGCCGATAAAGTCCCCCCTAACGCGAATGCCGGATCTCAAGGGTTCAACCCAGGCTTAATTGTTCTTCTGGTTGTTGGAGGGTTGCTATTGACATTCCTCATTGGAAATTATGTGCTCTACGTTTATGCACAGAAGACCATCCCTCCTAGAAAAAAGAAGCCCATCTCCAAAAAGAAGATGAAAAAGGAGAGATTGAAGCAAGGAGTCTCTGCACCTGGAGAGTAG 231 0.4632 MAADKVPPNANAGSQGFNPGLIVLLVVGGLLLTFLIGNYVLYVYAQKTIPPRKKKPISKKKMKKERLKQGVSAPGE* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0926 76 PANTHER DNA-BINDING PROTEIN S1FA2 10 76 IPR006779 GO:0003677|GO:0005634|GO:0006355
Tpr6g0926 76 MobiDBLite consensus disorder prediction 52 76 - -
Tpr6g0926 76 Pfam DNA binding protein S1FA 13 76 IPR006779 GO:0003677|GO:0005634|GO:0006355
Tpr6g0926 76 MobiDBLite consensus disorder prediction 52 66 - -
Tpr6g0926 76 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 10 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0926 Tpr-Chr6 8194056 8195868 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Tpr6g0926 S1FA 3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0926 - - gmx:100500059 114.005