Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0921 ATGAGCGTCATCGACATTCTAACCCGAGTCGATTCAATTTGCAAGAAATACGACCGATACGACGTCGTTAAGCAAAACGATTCCAATTTCTCCGCCGACGATGCATTCGCCAAACTCTACTCCGTCGTTGACGCCGACATCGAGGCTGCACTTCAGAAAGCAGAAACTGCTTCTAAGGAGAAAAATAGGGCTTCAACTGTAGCAACCAATGCTGAAATTCGTCGTACTAAGGCTAGGTTACTTGAAGAGATCCCCAAGTTGCAGAGATTGGCAGTAAAAAAGGTAAAGGGGCTTTCGTCGCAAGAATTTGCTGCCCGTAATGATTTGGTTCTTTCATTGCCAGAGAGGATCCAAGCTATCCCGGATGGGACCCCTGCTGCACCCAAACAAACTGGAGGTTGGGGAGCTTCTGCCTTACGTCCTGAAATTAAATTTGATTCAGATGGCCGATTCGAAGATGGATACTTTGAACAAACCAAAGAATCAAGTCAGTTTAGGGAGGAGTATGAAATGCGTAAAATGAAACAGGATCAAGGTTTGGATGTGATTGCAGAAGGATTGGATACTTTGAAAAACATGGCACATGATATGAATGAGGAATTTGATAAGCAAGTTCCACTGATGGATGAGATTGACACAAAGGTGGACAAGGCATCCTCTGACCTTAAAAATACCAACGTTAAACTTAAAGACACAGTTACCCAGCTACGATCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCCTATTTGTACAATGTGCTAAAATGA 795 0.4252 MSVIDILTRVDSICKKYDRYDVVKQNDSNFSADDAFAKLYSVVDADIEAALQKAETASKEKNRASTVATNAEIRRTKARLLEEIPKLQRLAVKKVKGLSSQEFAARNDLVLSLPERIQAIPDGTPAAPKQTGGWGASALRPEIKFDSDGRFEDGYFEQTKESSQFREEYEMRKMKQDQGLDVIAEGLDTLKNMAHDMNEEFDKQVPLMDEIDTKVDKASSDLKNTNVKLKDTVTQLRSSRNFCIDIVLLIIILGIAAYLYNVLK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0921 264 CDD SNARE_Qc 175 230 - -
Tpr6g0921 264 PANTHER SYNTAXIN-73 1 261 - -
Tpr6g0921 264 Pfam SNARE domain 207 256 IPR000727 -
Tpr6g0921 264 Coils Coil 70 90 - -
Tpr6g0921 264 SUPERFAMILY SNARE fusion complex 163 230 - -
Tpr6g0921 264 PANTHER SYNTAXIN 1 261 IPR045242 -
Tpr6g0921 264 Gene3D - 170 231 - -
Tpr6g0921 264 SMART tSNARE_6 165 232 IPR000727 -
Tpr6g0921 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0921 Tpr-Chr6 8147475 8150305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0921 1 264 SNARE and Associated Proteins AT3G09740 74.812 2.46e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0921 K08506 - gmx:100804155 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0921 6 8147475 8150305 Tpr6g0921 6 8147475 8150305 ECH