Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0920 ATGGACAAAAATCCTCACTCCGAAATTCAACTCCCTCCTGGATTTAGATTTCATCCTTCTGATGCAGAACTCATTGTTCATTATCTAAGAAACAAAGTGAATTCATCTCCTCTTCCTGCTTCATTCATAGCAGAAATAGATCTTTACAAATACAATCCATGGGAGCTTCCAAGTAAAGCTTTGTTTGGAGAGGAAGAATGGTATTTCTTTACTCCAAGGGACAGAAAGTATCCCAAAGGATTGAGGCCTAATAGAGCAGCTGGTGCAGGTTATTGGAAAGCTACTGGAACTGATAAACCTATTCTTACTTCACGTGGATTGAAAAGCATTGGAGTGAAGAAAGCCCTTGTGTTCTATAAGGGTCGTCCACCAAAAGGATCTAAAACTGACTGGATTATGCATGAGTATAGGTTGCATGATTCAATGATCTCAAATTCTAAGCATAGTGGTTCTATGAGACTGGATGAGTGGGTGTTATGCAGAGTTCGACAAAAAATAGGAAGTCCAAGAAGCAGCTGGGAAGATTCAAATGAACTAAGTTATGAACCAACAAATCAGTTTCAACAAATGAATGAGATCTCTAATCCTGAACCAGTAAAAAACTATGTGCAGAATGAATACCCATTGTTACCTTATATTTTGGCTTCTAAGACTGTTCTGCCTAGTTCCATTTGTATGGCCTCAGACAATGCAAAGCCCCATGCTTCATATTATGAAGACAAAGACAACTTAAACATAATAGGAGCACAGTTCTTATCATCTGCAACTGAGGGATTTTTCAATCCCCTGAAGAGAAAAGCTGTCGAAGATGATATCGAGATGGATTTTTATGCTGTCCTCAATAAAAATCTAAGCAGAGAAGGTGATAGTGTGAAGGAGAGACTTGAGAAAGATTTAAACAAAGAGTACAATTTCTACAACTTTGATCAGTGGACTTCAATCATACAACCTCATGAGCTTAATAGCTTAGCCTTTACTGGATATACATAA 990 0.3788 MDKNPHSEIQLPPGFRFHPSDAELIVHYLRNKVNSSPLPASFIAEIDLYKYNPWELPSKALFGEEEWYFFTPRDRKYPKGLRPNRAAGAGYWKATGTDKPILTSRGLKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLHDSMISNSKHSGSMRLDEWVLCRVRQKIGSPRSSWEDSNELSYEPTNQFQQMNEISNPEPVKNYVQNEYPLLPYILASKTVLPSSICMASDNAKPHASYYEDKDNLNIIGAQFLSSATEGFFNPLKRKAVEDDIEMDFYAVLNKNLSREGDSVKERLEKDLNKEYNFYNFDQWTSIIQPHELNSLAFTGYT* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0920 329 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Tpr6g0920 329 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Tpr6g0920 329 Gene3D NAC domain 20 167 IPR036093 GO:0003677|GO:0006355
Tpr6g0920 329 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Tpr6g0920 329 PANTHER NAC TRANSCRIPTION FACTOR 56 2 305 - -
Tpr6g0920 329 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0920 Tpr-Chr6 8144433 8146250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0920 7 170 NAC Transcription Factor Family AT1G69490 67.683 9.69e-82 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr6g0920 NAM 1.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0920 - - cam:101491216 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0920 6 8144433 8146250 Tpr6g0920 6 8144433 8146250 ECH