Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0901 ATGATACAGTTATTTGATGCAATCTTGTCTGGTATTATGAAGTGTTTTCCATTCCACTCTGGAGATAATAAAAAAGATGAACCGAAGGGCTTGCAATCCGCGTCGGGCCGTTCAGAAAGTTCCACATATGTTGATGCCGAAGGTAAAAGGTATAGTTCTGAATTGAATTCTCAGGATGTCTCGGATAGTGGCAGCGTGGATTCCCTCAGGAGGAACGCGCCTCCCAATATGTCCCAAAGACCTAGCAACCTTAGAGTGTTTACTGTATCTGAACTGAAATCAGCCACAAAGAATTTCAGTCGGTCTGTTATGCTTGGAGAGGGCGGGTTCGGTTGTGTCTATCAGGGTGTAATTAGAAGTGTAGACGACCCATCTAGAAGAATTGAGGTTGCAGTTAAACAACTTAGTAAAAGAGGAGTGCAGGGGCACAGGGAATGGGTGACAGAAGTGAATGTTCTAGGCATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGCTACTGTGCCGATGATGACGAAAGAGGTATCCAGCGGCTTCTGATATATGAATACATGCCTAACAGAAGTGTGGAACACCATTTATCTCACCGAGCAACAACTCCTCTCCCATGGAGTAGGAGAATAAAAATAGCACAAGACGCTGCTCGTGGATTAACATACCTGCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAACATCCTTCTGGATGATCAGTGGAATGCAAAGCTATCAGACTTTGGGTTAGCAAGACTTGGACCATCGGATGGACTAACCCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTACGCAGCTCCTGAGTATCTTCAAACCGGACGTCTCACATCAAAGAATGATGTGTGGAGCTACGGTGTTTTCCTTTATGAACTCATTACTGGCAGGCGCCCTTTAGATCGAAATCTCCCCAAGGGTGAACAGAAGTTGTTGGAATGGATAAAGCCATACCTATCAGATGCAAAGAAATTTCAACTTATATTGGATCCAAGGCTTGATAAGAAACAAGTAATCAAATCAGCTCAAAGACTTGCTACGATAGCTAACCGATGCTTAGTTAAAAATCCAAAGAGCCGACCAAAGATGAGCGAGGTTTTGCAAATGGTGAATGGAATAGTAGAATCATCATCCAGTGAAAATTCACATATGCCCTCGAAGAATGTGTCGAGAGTAGACGTTTCACACGACACTGAAATAAACACGAAGAAGAAACGGACTATGGATCAGAAGCCTGGAGAAAGTAATTGGTTTGTTAGGATGTGGAGACCAAAGCTTGGATGCTGA 1317 0.4328 MIQLFDAILSGIMKCFPFHSGDNKKDEPKGLQSASGRSESSTYVDAEGKRYSSELNSQDVSDSGSVDSLRRNAPPNMSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYQGVIRSVDDPSRRIEVAVKQLSKRGVQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRATTPLPWSRRIKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYLQTGRLTSKNDVWSYGVFLYELITGRRPLDRNLPKGEQKLLEWIKPYLSDAKKFQLILDPRLDKKQVIKSAQRLATIANRCLVKNPKSRPKMSEVLQMVNGIVESSSSENSHMPSKNVSRVDVSHDTEINTKKKRTMDQKPGESNWFVRMWRPKLGC* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0901 438 Pfam Protein kinase domain 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0901 438 SUPERFAMILY Protein kinase-like (PK-like) 75 380 IPR011009 -
Tpr6g0901 438 Gene3D Phosphorylase Kinase; domain 1 71 184 - -
Tpr6g0901 438 Gene3D Transferase(Phosphotransferase) domain 1 185 409 - -
Tpr6g0901 438 PANTHER KINASE 1B 21 434 - -
Tpr6g0901 438 MobiDBLite consensus disorder prediction 386 422 - -
Tpr6g0901 438 MobiDBLite consensus disorder prediction 24 83 - -
Tpr6g0901 438 PANTHER OS01G0588500 PROTEIN-RELATED 21 434 - -
Tpr6g0901 438 CDD STKc_IRAK 105 383 - -
Tpr6g0901 438 MobiDBLite consensus disorder prediction 33 83 - -
Tpr6g0901 438 ProSiteProfiles Protein kinase domain profile. 99 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0901 438 ProSitePatterns Protein kinases ATP-binding region signature. 105 133 IPR017441 GO:0005524
Tpr6g0901 438 MobiDBLite consensus disorder prediction 400 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0901 Tpr-Chr6 7850549 7854541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0901 85 377 Glycoside Hydrolase AT3G07070 47.119 2.97e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr6g0901 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0901 - - gsj:114400704 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0901 6 7850549 7854541 Tpr6g0901 6 7850549 7854541 ECH
Tpr6g0901 6 7850549 7854541 Tpr1g3935 1 43608846 43613740 PCT