Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0866 ATGGTAGTTGCAGAACAAACCACCAATGGTGTCCTTAGTTTCACCTACAAACTTCTCATAGGTCGTTGGTTCATGTTATATGCATCTTCACTAATTATGTCGGTGGCAGGTGCAACCTATATGTTTGGTCTATACTCAAACCAAATCAAAACATCTTTGTCCTATGACCAAGAAACACTTAACCTTCTTAGTTTCTTCAAAGATCTTGGCGCCAATGTCGGCGTTATATCCGGTTTAATCAACGAAATAACGCCGCCTTGGGTCGTTCTTTTAACCGGTACCATCATGAATTTCTTTGGTTACTTCATGATATGGCTTTCTGTTACAAAAAAAATTCCCACACCAAAAGTGTGGCAAATGTGTCTTTATATTTGTTTTGGTGCAAATTCTCAAACTTATACTAACACTGGTGCTTTAGTTACTTGTGTTAAGAATTTTCCTAATAGTCGTGGTAGTGTTTTAGGACTTTTAAAAGGTTATGTTGGATTAAGTGGTGCTATAATTACACAAATTTATCATAGTTTATATTATAATAATGATAATAATAATACTCAATCTCTTATTTTGCTTATTGCTTGGCTTCCTGCAGCTGTTTCTTTTATTTTTCTTCCAACTATTAGAATTTTGAAATTGGAAAATATATTTCAACAAAAAAAAGAAACAAAAGTTTTTTATAATTTTCTTTTTATTTCACTTGGTCTAGCTTTTTTTCTCATGGTTTTGATAATTGTTCAAAATAAGTTCACTTTTTCAAGGATTGAGTATATAAGTGATGGAGTTGGTGTAATTTTTTTACTCCTTCTTCCACTTGTTGTGGTATTTAGAGAAGAATTAAAATTCAACAACTTTTCGAAGGATAATTCAGTTTCTGAGTTGAAAGTAGTTACTGATGTCCCACTTCAGAATGTGTCATCACACGAAAATGAAGCGGAAGTATCAGCAACTAATGTGAATTCGGAGAAGCAAATTTCTTGTTTGAGGACAATATTCAAACCTCCGAATAGAGGTGAAGACTACACAATTTTGCAAGCTTTGTTTAGTATTGACATGTTAATTCTTTTCGTAGCAACAACTTTTGGCGTTGGTGGAACATTAACTGCGATTGATAATTTGGGACAAATCGGTCATTCGTTAGGATATCCGAATAAAAGTACTACAACTTTCGTGTCACTAGTGAGTATATGGAACTATCTAGGACGAGTTGCATCGGGTTATATATCGGAGATCTTATTAACTAAATACAAAATCCCTCGTCCGTATCTACTCACTTTCATTATGTTTTTCTCTTGTGTTGGTCATATTCTAATCGCTCTTGGTATCTCAAACTCTCTTTATATCGCTTCAGTGGTTATTGGATTTTGTTTTGGAGCTCAATGGCCGTTGATGTTCGCGATCATTTCGGAGATTTTTGGATTGAAATATTACTCAACTTTGTACAATTTTGGAGCAGTGGCAAGTCCTGTGGGATCTTATATATTTAATGTGAGAGTGGCTGGTTATTTATATGACAAAGAAGCTTTGAAACAATTAAAGGCTAAGGGACTAAAGAGACAAAAAGGGGAGGACTTAACTTGTGTTGGAGTAGAGTGTTATAGGTTGGCTTTTATTATAATTACAGCATCAACTTTAATTGGATGTTTTGTTTCTTTTATTTTAGTGCTTAGGACTAGAAAATTTTATAAAGGGGATATATATGGAAAGTATAGGGAGGAACTTGAAGCAGCGGAGGCTGAGATGAGGAATGTGAAAAATGGTGATGTAGTGTATGAAAGTGAAGACAACGGCAATACGAACGACGTTAGGCGCCGTGTATGA 1815 0.346 MVVAEQTTNGVLSFTYKLLIGRWFMLYASSLIMSVAGATYMFGLYSNQIKTSLSYDQETLNLLSFFKDLGANVGVISGLINEITPPWVVLLTGTIMNFFGYFMIWLSVTKKIPTPKVWQMCLYICFGANSQTYTNTGALVTCVKNFPNSRGSVLGLLKGYVGLSGAIITQIYHSLYYNNDNNNTQSLILLIAWLPAAVSFIFLPTIRILKLENIFQQKKETKVFYNFLFISLGLAFFLMVLIIVQNKFTFSRIEYISDGVGVIFLLLLPLVVVFREELKFNNFSKDNSVSELKVVTDVPLQNVSSHENEAEVSATNVNSEKQISCLRTIFKPPNRGEDYTILQALFSIDMLILFVATTFGVGGTLTAIDNLGQIGHSLGYPNKSTTTFVSLVSIWNYLGRVASGYISEILLTKYKIPRPYLLTFIMFFSCVGHILIALGISNSLYIASVVIGFCFGAQWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYIFNVRVAGYLYDKEALKQLKAKGLKRQKGEDLTCVGVECYRLAFIIITASTLIGCFVSFILVLRTRKFYKGDIYGKYREELEAAEAEMRNVKNGDVVYESEDNGNTNDVRRRV* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0866 604 PANTHER MFS TRANSPORTER 9 594 - -
Tpr6g0866 604 SUPERFAMILY MFS general substrate transporter 13 210 IPR036259 -
Tpr6g0866 604 Pfam Major Facilitator Superfamily 359 555 IPR011701 GO:0022857|GO:0055085
Tpr6g0866 604 Gene3D MFS general substrate transporter like domains 329 560 IPR036259 -
Tpr6g0866 604 Coils Coil 565 585 - -
Tpr6g0866 604 CDD MFS_Mch1p_like 21 546 - -
Tpr6g0866 604 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 594 - -
Tpr6g0866 604 SUPERFAMILY MFS general substrate transporter 226 559 IPR036259 -
Tpr6g0866 604 Pfam Nodulin-like 22 274 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0866 Tpr-Chr6 7457839 7460189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0866 2 571 Nodulin-like Gene Family AT2G39210 62.827 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0866 - - gmx:100818752 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0866 6 7457839 7460189 Tpr1g0261 1 2184292 2186360 ECH
Tpr6g0866 6 7457839 7460189 Tpr6g0866 6 7457839 7460189 ECH