Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0841 ATGAGATTCAACAGATACAAAACCCTCTTTTGGCTTTCCGGCTTTGTCATCTTTCTCTTTTCTATCATTATTGTTCATTACACCACACCACTTTCCAATACCTCTAACACTTCCATTAGTAGTTCTCAAAGTATTTTTGGTTTTCAACTTAGCATATTGAGCAAGATTATAAAGCTAAGTGGTGCTCAAGATTTTGTTTCTTTGTTTATAACAAATATTGCGAGTAGGAAACATCATCATAGGAAGAGGCACAAGGAAAAATGTGATAAGGCTAAATGGACTTCCAAGCTAATTTTAGACTATTATGCGACCACGGTTTTTACCGTTGATTTAAAGGGTTGTGCTAACTTTTCTAGCGTGCAAAAAGCAATTGACGCTGTTCCTGAATCTAGCTCTAATATCACTCGTATCGTAATCAACTCTGGTACATACAGAGAGAAAGTAGTGGTCCAAGCCAACAAAACAAACATAATACTACAAGGTCAAGGGTATCTTAATACAATTATAGAATGGAATGACACTGCAAATTCCACTGGCGGAACTTCCTATAGCTACTCATTTGCAGTCTTTGCTTCTAAGTTCACAGCTTATAACATTAGCTTTAAGAACACCGCTCCTCCACCATCACCGGGAGAGGTTGGGGCACAGGCCGTGGCACTGAGAGTTACTGGCGATCAATCGGCATTCTATGGATGTGGATTTTATGGTGCGCAGGACACACTCAATGATGACAATGGGAGACACTATTTTAAGGAATGTTTCATTCAAGGATCCATTGATTTCATATTTGGAAATGCTAGATCGCTTTATGAGGATTGTACTATAAACTCTATAGCAAAACAAGATTTGGTTGGCATTGGTGGATCAATCACAGCTCAAGGACGACAATCTTTGAAGGAACAGACAGGTTTTTCCTTTGTGAATTGCAACATTGTTGGAAGTGGAAAAGTGTGGCTTGGAAGAGCTTGGGGAACATTTGCCACAGTCATTTTTTCAACAACAAACATGTCTGATGTCATTGCTGCTGAGGGATGGAATGATTGGAGAGATCCATCTAGAGATCAGAGTGTCTTCTTTGGGGAGTACCATTGTATAGGACTTGGTGCAAATTATACATCTAGAGTCTCTTATGCAAGACAACTGAGGGATTATGAAGCAATCTCATATATAAATGTTTCATACATTGATGGGAATGATTGGCTACTTAATTATAATTAG 1218 0.3859 MRFNRYKTLFWLSGFVIFLFSIIIVHYTTPLSNTSNTSISSSQSIFGFQLSILSKIIKLSGAQDFVSLFITNIASRKHHHRKRHKEKCDKAKWTSKLILDYYATTVFTVDLKGCANFSSVQKAIDAVPESSSNITRIVINSGTYREKVVVQANKTNIILQGQGYLNTIIEWNDTANSTGGTSYSYSFAVFASKFTAYNISFKNTAPPPSPGEVGAQAVALRVTGDQSAFYGCGFYGAQDTLNDDNGRHYFKECFIQGSIDFIFGNARSLYEDCTINSIAKQDLVGIGGSITAQGRQSLKEQTGFSFVNCNIVGSGKVWLGRAWGTFATVIFSTTNMSDVIAAEGWNDWRDPSRDQSVFFGEYHCIGLGANYTSRVSYARQLRDYEAISYINVSYIDGNDWLLNYN* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0841 405 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 12 403 - -
Tpr6g0841 405 Gene3D - 102 405 IPR012334 -
Tpr6g0841 405 PANTHER PECTINESTERASE 14-RELATED 12 403 - -
Tpr6g0841 405 SUPERFAMILY Pectin lyase-like 103 401 IPR011050 -
Tpr6g0841 405 Pfam Pectinesterase 109 398 IPR000070 GO:0030599|GO:0042545
Tpr6g0841 405 ProSitePatterns Pectinesterase signature 2. 255 264 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0841 Tpr-Chr6 7236401 7239146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0841 77 401 Carbohydrate Esterase AT1G05310 54.573 6.46e-123 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0841 - - gmx:100802034 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0841 6 7236401 7239146 Tpr1g2282 1 25636256 25639197 PCT