Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0835 ATGGACACAGTGTTGGTACCACCATGGTTAGAACCATTGTTGAAAACACCGTTTTTCAATATGTGTCGGATTCACGCTGACGCAGCTAGAAATGAGTGTAACATGTATTGTTTAGATTGCAACAATGGCGACGGTGCTTTTTGTTTTTACTGCCGTTCTTCAAGACACAAAGATCACCAAGTCATTCAGATAAGAAGATCTTCGTATCATGATGTAGTGAGAGTATCAGAGATTCAGAAAGTGTTAGACATAAGTGGAGTACAAACATATGTGATAAACAGTGCTAGAGTTTTGTTCTTGAATGTGAGGCCACAACCAAAATCTGGGAAAGGAGTAGCACACATTTGTGAGATTTGTGGAAGGAGTTTATTGGATTCATTTCGGTTCTGTTCTTTGGGATGTAAGCTTGAAAGAATAAAGAAAAATGGAGATTCAAGCTTTGCTTTAGAGGGTATGAGTGAAGCATTAACAATGGAAGGGGTATCAAGTAGTAAATCAGAAGAAGAATTGCGTGAAGGCTCAACACAAGATATGTATCCTGTCACGCCTCCTCCACCTCCCTTAAATTCAAGGAGAAGAAAAGGTATTCCTCATAGGGCACCTTTTGGTTCCTCATTCTAA 621 0.3945 MDTVLVPPWLEPLLKTPFFNMCRIHADAARNECNMYCLDCNNGDGAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDSFRFCSLGCKLERIKKNGDSSFALEGMSEALTMEGVSSSKSEEELREGSTQDMYPVTPPPPPLNSRRRKGIPHRAPFGSSF* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0835 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 203 - -
Tpr6g0835 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 203 - -
Tpr6g0835 206 SUPERFAMILY B-box zinc-binding domain 19 66 - -
Tpr6g0835 206 MobiDBLite consensus disorder prediction 159 206 - -
Tpr6g0835 206 Pfam PLATZ transcription factor 65 136 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0835 Tpr-Chr6 7175782 7179065 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr6g0835 PLATZ 8.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0835 - - gmx:100803083 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0835 6 7175782 7179065 Tpr1g4285 1 49859910 49862057 PCT