Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0828 ATGATTGTTGAATCAAACAGTAGCCGTTTTAGCTATGCCTTTCTTCTTTGCCTTTTCCTTTGTCACTATACTTCTTCACAAAAGACTTGTCCAAATTGTGGCTATATGAAAGTTCCGTATCCTTTGAGTACGGAACAAAACTGCGGCGATCCATTCTATAGGATTCGTTGTGATCCTCATTCTCAAAAGCTTTACTTCGACACTCTCAATGGTAGTTCCTATGTTGTACTCAAAATCATGTCTTCGATTCAGCGCATGGTGTTGCAGTCATCACCTTGGTTACCTAGTTCATGTGTCACACAAGACATGCCGGTAAGCAACGGTATTTGGTTAAATCAATCACTTCCTTTCAACATAACTTCATCCAACACAGTGTTCCTCTTCAACTGTTCCCCTCGCCTCTTGGTTTCACCTCTTAATTGCACTTCTTCTAGTATTTGTCATCGTTACTTGGAAAATTCAGGTCATGTTGACAAAAATCGAGCAGTCGAGTGTGCAAGTGGTCTTCACCCTTGTTGCACTTTTGTTGCTGGTGGCATGCCTTCGGCTTACAAGATTCGCCTTCACAGTTCTGGTTGCAAGGCATTCAGAAGCATCCTTCATTTGGACCAAGACAAACCTCCTAATCAGTGGGAGGAAGGCCTAGAGATTCAATGGTCTCTTCCATCTGAACCTGTATGCAGGACACAAAGTGATTGTTCTAGAGACTCTAAGTGTTCGCCTTCTAGTAGAGACACACTCTTTCGCTGTCTTTGCAATAGCGAATTCCATTGGGACCCTTTTGCAGCAACCTGTATAAGGTACAAGAGAAAATCCAAATGGAAAACCAGCTTGGTTGTCTCAATAGTTGTTATTGCTTTTTTCTCATTGGCCGTGGTTCTCGTCATCATCACAAAATCCTTCAAACATAGGGAGAAGAAGGCCAAGGAAAGAGAAATTGTACTGAAATCAAACACTGGTGGAGAGAAACCTTACAAAACATTTCAACTGAAAGAGTTGAAGAAAGCAACAAAATGTTTTTCTCAAGATAGGATCTTAGGAAGTGGTGGCTTTGGAGAAGTTTACAAAGGTGAACTACAAAATGGAACAATTGTAGCTGTCAAGAAAGCTAGAGTTGGTAACCTCAAAAGCACTCAACAAGTGCTTAATGAGGTTTCAATACTTTCTCAAGTCAATCACAAGAACCTAGTCAGACTCTTAGGCTGCTGTGTAGAATCTGAGCAACCATTGATGATCTATGAATATATCTCAAATGGTACCCTCTATGACCATCTTCATGATAGGTATCCCAATTTTCTAGACTGGAAAAAAAGGCTTAAGATTGCTTTTCAAACAGCTGAAGCATTGGCTTACTTGCATTCTTCTGCACATACCCCTATTTACCATAGAGATGTTAAGTCAACAAATATACTATTGGACGATGAATTCGATGCAAAAGTTTCGGATTTTGGACTCTCAAGATTGGCTAACCCGGGACTTAGTCATGTGTCTACCTGTGCTCAAGGAACACTAGGTTACTTGGATCCTGAATACTATCGCAACTACCAGTTAACCGATAAAAGTGATGTTTATAGCTACGGAGTTGTACTGCTAGAGCTTTTGACTTCGCAGAAAGCAATAGACTTTTCTCGTGATCAAGATGATGTTAACTTGGTAATTCATGTGAGTCAATATGCAAGCAACGGCGCAATCATGCAAGTCGTTGATCAAAGGCTTCTTCTATCTGTGGAACCCTTAAGTAGTAAATTGATCACAAGCATAAAGCTCTTTTGGGAGCTTGCACATGATTGTCTTAGAGAGAAGAAAGTTGAAAGGCCTAGTATGAGGGATATTGTTGAACGCCTCCTATGCATAATTAGGATTGAAGACCAAGAGTGA 1878 0.4052 MIVESNSSRFSYAFLLCLFLCHYTSSQKTCPNCGYMKVPYPLSTEQNCGDPFYRIRCDPHSQKLYFDTLNGSSYVVLKIMSSIQRMVLQSSPWLPSSCVTQDMPVSNGIWLNQSLPFNITSSNTVFLFNCSPRLLVSPLNCTSSSICHRYLENSGHVDKNRAVECASGLHPCCTFVAGGMPSAYKIRLHSSGCKAFRSILHLDQDKPPNQWEEGLEIQWSLPSEPVCRTQSDCSRDSKCSPSSRDTLFRCLCNSEFHWDPFAATCIRYKRKSKWKTSLVVSIVVIAFFSLAVVLVIITKSFKHREKKAKEREIVLKSNTGGEKPYKTFQLKELKKATKCFSQDRILGSGGFGEVYKGELQNGTIVAVKKARVGNLKSTQQVLNEVSILSQVNHKNLVRLLGCCVESEQPLMIYEYISNGTLYDHLHDRYPNFLDWKKRLKIAFQTAEALAYLHSSAHTPIYHRDVKSTNILLDDEFDAKVSDFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDQDDVNLVIHVSQYASNGAIMQVVDQRLLLSVEPLSSKLITSIKLFWELAHDCLREKKVERPSMRDIVERLLCIIRIEDQE* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0828 625 ProSiteProfiles Protein kinase domain profile. 340 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0828 625 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Tpr6g0828 625 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 625 IPR045274 GO:0007166
Tpr6g0828 625 CDD STKc_IRAK 346 615 - -
Tpr6g0828 625 SMART serkin_6 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0828 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Tpr6g0828 625 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 21 625 - -
Tpr6g0828 625 SUPERFAMILY Protein kinase-like (PK-like) 323 615 IPR011009 -
Tpr6g0828 625 Gene3D Transferase(Phosphotransferase) domain 1 416 625 - -
Tpr6g0828 625 Pfam Protein tyrosine and serine/threonine kinase 342 615 IPR001245 GO:0004672|GO:0006468
Tpr6g0828 625 Gene3D Phosphorylase Kinase; domain 1 297 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0828 Tpr-Chr6 7134721 7137287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0828 30 625 Receptor kinase-like Gene Family AT5G02070 46.890 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr6g0828 PK_Tyr_Ser-Thr 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0828 - - mtr:MTR_7g103180 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0828 6 7134721 7137287 Tpr6g0828 6 7134721 7137287 ECH