Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0818 ATGGAATCCAATGGAATATTTCCTACCATTAATAATGGATTTCTAGCAGTAGAAAACCCTTCAAAACAACAAAACCTTCAAAATCAACAAAATCCTCACACTTTACAACATCACCAAATGGTTTCATATGATCAACCTCATCAATCAATAAAACAAGGCTACCCTTATTCATCAAAAACAAACAATAACAAACCACAACAACAAATCAACCTAAGCGACGAAGATGAGCCGTGTTTCGGAGCAGATGAAGCCTCTATTGGTGACCCAAAAAGAAAAGGATCACCATGGCATAGAATGAAATGGACAGATACAATGGTAAGACTCTTAATAATGGCTGTTTATTACATTGGTGATGAAGCTGGTACTTCTGAATTAGGCACTGATAATAAAAAGAAAAACAATGGTTTGTTACAAAAGAAAGGTAAATGGAAATCAGTTTCTAAAGGAATGATGGAAAAAGGTTACTATGTTTCACCTCAACAATGTGAAGATAAGTTCAATGATTTGAACAAAAGATACAAAAGAGTTAATGATATTCTTGGTAAAGGAACAGCTTGTAGAGTTGTTGAAAATCAAAGTTTGATGGATACTATGGATTTGTCTATAAAATTGAAAGATGAAGCTAGAAAACTTTTGAATTCAAAGCATCTTTTCTTTAGAGAAATGTGTGCTTATCATAATAGTTGTGGACATGTAAACAACAATAACAATTTGCAACAACAATCGTCGACGGAGACAGAGACTCAACCACAACATCATCAACATCAACAACCGCAGCAGCAACAACCGCAACAACAATGTTTACATTCATCAAATGGAGTAGGAATGTTGAAGTTGAAAGGAAAAAGTGGTGAAGAGGAAGAAGATGAAGATGAAGAAGATGAATGGGAAGATGATTCTGAAGAGGAAGAAGATGAGAATATTGAAGAAGATGAGAATGTTGATCATTTGAGGAAAAAATCAAAGAAAGTTTCATCATTGGTTATGCAACAGTTGAGTAGTGAAGTGATGAATGTGTTGCAAGATGGAGTGAAGAGTAGTTGGGAGAAAAAGCAATGGATGAAGAAAAGGGTGGTGCAATTAGCAGAAGAACAAATAAATTATCATGTTGAAGCATTTGAGATTGAAAAACAAAGGTTAAAATGGGCAAAGTTTAGTGGTAATAAAGAAAGGGAAATGGAGAAAAATAAACTTGAAAATGAAAGGAGGAGTTTGGAAATTGATAGAATGGTTTTGTTGCTTAGACAGAAGGAGCTTGAGTTGCAGAATACTCACCAGATGCAACAGCAACAGCAGCAGCAGCATTCTTCTACTTAG 1317 0.3478 MESNGIFPTINNGFLAVENPSKQQNLQNQQNPHTLQHHQMVSYDQPHQSIKQGYPYSSKTNNNKPQQQINLSDEDEPCFGADEASIGDPKRKGSPWHRMKWTDTMVRLLIMAVYYIGDEAGTSELGTDNKKKNNGLLQKKGKWKSVSKGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLMDTMDLSIKLKDEARKLLNSKHLFFREMCAYHNSCGHVNNNNNLQQQSSTETETQPQHHQHQQPQQQQPQQQCLHSSNGVGMLKLKGKSGEEEEDEDEEDEWEDDSEEEEDENIEEDENVDHLRKKSKKVSSLVMQQLSSEVMNVLQDGVKSSWEKKQWMKKRVVQLAEEQINYHVEAFEIEKQRLKWAKFSGNKEREMEKNKLENERRSLEIDRMVLLLRQKELELQNTHQMQQQQQQQHSST* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0818 438 MobiDBLite consensus disorder prediction 56 77 - -
Tpr6g0818 438 Gene3D - 101 175 - -
Tpr6g0818 438 MobiDBLite consensus disorder prediction 286 311 - -
Tpr6g0818 438 MobiDBLite consensus disorder prediction 56 73 - -
Tpr6g0818 438 Pfam Myb/SANT-like DNA-binding domain 98 224 IPR044822 -
Tpr6g0818 438 Coils Coil 388 434 - -
Tpr6g0818 438 Coils Coil 286 320 - -
Tpr6g0818 438 MobiDBLite consensus disorder prediction 279 320 - -
Tpr6g0818 438 PANTHER F16F4.11 PROTEIN-RELATED 4 438 - -
Tpr6g0818 438 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 4 438 - -
Tpr6g0818 438 MobiDBLite consensus disorder prediction 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0818 Tpr-Chr6 7036155 7037861 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr6g0818 Myb_DNA-bind_4 3.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0818 - - aprc:113863792 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0818 6 7036155 7037861 Tpr6g0818 6 7036155 7037861 ECH
Tpr6g0818 6 7036155 7037861 Tpr1g4232 1 49185185 49187650 PCT