Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0792 ATGAACACAAAAACACTAGCATTACCCTTAACCTTAACCTTAGTAGTATTTCTATGCACATTACCATCATTAACACAAAGTGCACAACAAAATGATACCCATGCCCTCACCGAATTCCGTCTCAAAACGGACTTCCACGGCTACCTTGTCAGTAATTGGACTGGCGAGGATGCCTGCAACGCCGCATGGCGCGGCGTTGAATGCTCCCCGAACGGCAGAGTTGTAGCTCTCTCCGTTCCTTCCCTTAATCTCCGAGGTCCCGTTGATTCTCTCTCGACGCTAATCTACTTACGCTTCCTTGACCTACACGATAACCGTTTAAACGGAACCATTGTTCCTCTTTTAAACTGCACTGATCTTGAACTTCTCTATCTCTCACGCAACGACTTCTCCGGCGAGATACCACCGGAGATATCATCGTTACGGTTTCTTATCAGACTCGACATCTCTGATAACAATATCCACGGTAAAATCCCTAAAGAAATATCAAAATTGAATCATCTCCTCACTCTCCGGTTACAGAACAATGAACTCTCCGGCGAAGTTCCCGATCTTTCTTCTTCCCTAAACAATCTCAGAGAACTCAACATCACCAACAATGAACTCCAAGGACACTTACCAGACGCAATGGTTACCAAATTCGGTAACAAAAGCTTCTCCGGTAACGACGGTCTTTGCGGATCGAGTCCGTTACCGAATTGTTCCGTCACCGGAACTCCTCATCCACCTTCCGATGATGCTGGTTCCGAAATCGTTCCTTCAAACCCTAGCTCAATCCCAAAAACTAGTAACAGTACTCACGGTATAATTCCATCTGAAACTCCGAGAAAACGGAAAATGTTGAGTCCGGGAGGAATTGTGGCAGTTGCGGTGGCGGTTTCCGTGGTTTTACTGATGGCGGTTTCTTACACGGTGGCGCAATGTTGCGGAAGAGGAAGATCTAATTCAACGGTTGGGATGGATAGTGAGATTGGTAAGAGAAAAAGTGATAGTAGTAGTGGAAGCGAGAAAAAAGGGTACCGTGGAAATAGTAATAATGGGGGTGTAGATAGAGATAGTGATGGAACAATAACTGAAACAGAGAGAAGTAAATTAGTGTTTTTTGATAGGAGGAATGAGTTTGAGTTAGAGGATTTGCTAAAAGCTTCAGCAGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAGGGCTATTCTTGATGATGGATGTACTGTTGCTGTTAAGAGACTTAAGGATGCCAACCCTTGTGATAGGAACCAGTTTGAACAGTATATGGATGTTGTGGGGAAGCTTAGACACCCTAATGTTGCTAGACTTAAAGCTTATTATTATGCTAAGGAAGAAAAGCTTTTGGTTTATGATTATCTTTCCAATGGAAGCTTGCATGCTCTTCTTCATGGAAACCGAGGTCCGGGAAGGATTCCGTTAGATTGGACAACAAGAATAAGCTTGGTGTTGGGGGCAGCAAGAGGCCTTGCAAGGATTCATGGAGAGTATAGTGCAGCCAAGATACCTCATGGGAATGTGAAATCTTCCAATGTGCTACTTGACAAGAATGGGGTTGCTTGCATAGGTGACTTTGGTTTGTCGCTATTGTTAAACCCTGCTCACGCGGTTGCGAGGTTGGGTGGGTACAGAGCTCCAGAGCAGGCGGAAGCGAAGAAACTCTCACAAGAGGCAGATGTGTATGCTTTTGGGGTGTTGGTATTAGAAGTTTTGACAGGAAAAGCCCCTTCCTCCTCTCAGCATTCTTCTCCTGTAGGAGTTCGCCCTTGTGTGGAATTCGATGAACAAGTAGCAGATCTTCCAAAATGGGTTCGGTCAATTGTGAAGGAAGAGTGGACATCAGAGGTGTTTGATCAAGAACTTTTGAGGTACAAGAACATTGAGGAGGAGCTTGTTTCAATGCTGAATGTAGGATTGGCCTGTGTTGTGTTACAACCTGAGAAAAGGCCAACTATGTTGCAAGTTGTTAAGATGATTGAGGACATTAGAGTTGAACAATCTCCTCTAAGAGAGGATTATGATGAATCGCGCAATTCACTTTCACCTTCACTTGCAACTACTGAAGATTGCCTAGCTTAA 2088 0.4435 MNTKTLALPLTLTLVVFLCTLPSLTQSAQQNDTHALTEFRLKTDFHGYLVSNWTGEDACNAAWRGVECSPNGRVVALSVPSLNLRGPVDSLSTLIYLRFLDLHDNRLNGTIVPLLNCTDLELLYLSRNDFSGEIPPEISSLRFLIRLDISDNNIHGKIPKEISKLNHLLTLRLQNNELSGEVPDLSSSLNNLRELNITNNELQGHLPDAMVTKFGNKSFSGNDGLCGSSPLPNCSVTGTPHPPSDDAGSEIVPSNPSSIPKTSNSTHGIIPSETPRKRKMLSPGGIVAVAVAVSVVLLMAVSYTVAQCCGRGRSNSTVGMDSEIGKRKSDSSSGSEKKGYRGNSNNGGVDRDSDGTITETERSKLVFFDRRNEFELEDLLKASAEMLGKGSLGTVYRAILDDGCTVAVKRLKDANPCDRNQFEQYMDVVGKLRHPNVARLKAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHGEYSAAKIPHGNVKSSNVLLDKNGVACIGDFGLSLLLNPAHAVARLGGYRAPEQAEAKKLSQEADVYAFGVLVLEVLTGKAPSSSQHSSPVGVRPCVEFDEQVADLPKWVRSIVKEEWTSEVFDQELLRYKNIEEELVSMLNVGLACVVLQPEKRPTMLQVVKMIEDIRVEQSPLREDYDESRNSLSPSLATTEDCLA* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0792 695 PANTHER LRR RECEPTOR-LIKE KINASE 7 686 - -
Tpr6g0792 695 SUPERFAMILY Protein kinase-like (PK-like) 385 662 IPR011009 -
Tpr6g0792 695 MobiDBLite consensus disorder prediction 336 353 - -
Tpr6g0792 695 Gene3D Phosphorylase Kinase; domain 1 351 456 - -
Tpr6g0792 695 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 686 - -
Tpr6g0792 695 Pfam Protein kinase domain 385 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0792 695 SUPERFAMILY L domain-like 30 211 - -
Tpr6g0792 695 MobiDBLite consensus disorder prediction 673 695 - -
Tpr6g0792 695 MobiDBLite consensus disorder prediction 234 280 - -
Tpr6g0792 695 MobiDBLite consensus disorder prediction 250 271 - -
Tpr6g0792 695 Pfam Leucine Rich Repeat 191 208 IPR001611 GO:0005515
Tpr6g0792 695 MobiDBLite consensus disorder prediction 316 355 - -
Tpr6g0792 695 Gene3D Transferase(Phosphotransferase) domain 1 457 686 - -
Tpr6g0792 695 ProSiteProfiles Protein kinase domain profile. 381 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0792 695 Gene3D Ribonuclease Inhibitor 24 90 IPR032675 -
Tpr6g0792 695 Gene3D Ribonuclease Inhibitor 91 239 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0792 Tpr-Chr6 6728975 6732522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0792 30 691 Receptor kinase-like Gene Family AT2G36570 63.378 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr6g0792 Pkinase 1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0792 - - gmx:100808402 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0792 6 6728975 6732522 Tpr6g0792 6 6728975 6732522 ECH
Tpr6g0792 6 6728975 6732522 Tpr1g4229 1 49164571 49167719 PCT