Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0771 ATGTCTGAAAACACTACAACTTATGCATCCTCGTCTTCATCGGGGAAAGTTTTGTCTGGTCGTCATCCGGTGTACCGAGGAGTGAGACGTAGGAGTAATGGAAAATGGGTATCTGAAATCCGCGAACCTAGAAAACCTAATAGAATTTGGTTAGGAACATTTCCGACACCTGAAATGGCAGCTACTGCTTATGATGTAGCTGCTCTTGCTCTTAAGGGTAAAAATGCTATATTGAATTTCCCTAATTCTTCTTCTTCTTTGCCTGTGCCTGAGTCTTCCTCTGCTCGTGATATACAGACAGCTGCAGCTTGTGCTGCAGCTGCTGTAGGCGCAGCAGAGGATGCACTCACAAGTAATATTAATGAGGGAAATAATAATCATGCAGCAATGGCGCCGCAGCATGAGTTTGTTGCAAGTGCGAATGAGAACAACAATGTTAACCATGAGTTTGTTGATGAGGATTTGATATTTGATATGCCTAATGTTTTGGTTAATATGGCTGAAGGAATGCTTCTAAGTCCTCCTCGTTTTGACTTTGCAAGTGATGAGTATGATGCACAAGAAAATAATATGTGTGATGATTCAAACCTTTGGAGTTATCCTTATTTCCCATAA 615 0.413 MSENTTTYASSSSSGKVLSGRHPVYRGVRRRSNGKWVSEIREPRKPNRIWLGTFPTPEMAATAYDVAALALKGKNAILNFPNSSSSLPVPESSSARDIQTAAACAAAAVGAAEDALTSNINEGNNNHAAMAPQHEFVASANENNNVNHEFVDEDLIFDMPNVLVNMAEGMLLSPPRFDFASDEYDAQENNMCDDSNLWSYPYFP* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0771 204 MobiDBLite consensus disorder prediction 1 24 - -
Tpr6g0771 204 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Tpr6g0771 204 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Tpr6g0771 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 6 201 - -
Tpr6g0771 204 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Tpr6g0771 204 PRINTS Ethylene responsive element binding protein signature 63 83 IPR001471 GO:0003700|GO:0006355
Tpr6g0771 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 201 - -
Tpr6g0771 204 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Tpr6g0771 204 Gene3D AP2/ERF domain 24 82 IPR036955 GO:0003700|GO:0006355
Tpr6g0771 204 CDD AP2 25 83 IPR001471 GO:0003700|GO:0006355
Tpr6g0771 204 Pfam AP2 domain 23 73 IPR001471 GO:0003700|GO:0006355
Tpr6g0771 204 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0771 Tpr-Chr6 6487363 6488903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0771 20 201 AP2-EREBP Transcription Factor Family AT2G36450 63.978 4.21e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr6g0771 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0771 - - cpap:110822666 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0771 6 6487363 6488903 Tpr6g0771 6 6487363 6488903 ECH
Tpr6g0771 6 6487363 6488903 Tpr1g4205 1 48831223 48831899 PCT
Tpr1g4164 1 48189629 48190253 Tpr6g0771 6 6487363 6488903 PCT