Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0769 ATGGCTCAAAAGTACTTACATGAGCTACTAAAGGAAGATCAAGAACCATTTTTTCTCAACAACTACATTTCAGATAAACGTAACCAAATGAAAATCACTACTACTTTACAACTCAACAAAAAACCAATAAACTCAAAATTCAACATAAATCTATGTAAAAACACTTCTTGTTTTTTCTCATTTCCACAAACACCAGACTTCAAAAAATCACCACTTTTTGAACTAACTTCACCTGTTAAAAGTCCTTGCAAAATCCCTTCTAGAACTGCAACTCTTCTTCTTGAAGCTGCTCTTAGGATCCACAAACATTCATCATCTTCTTCTTCAAATCATAAAACTAAAAACAAAGGTTTTGGTCTATTTGGGTCTTTATTCAAGAAACTCAAGCAAAGAAACCAGAACCGTAAACTTGAATTAGAGACTGAAAATGTTTCTGTGAAAGATATATTGAAGTGGGATTCTTCTGTGAAACGTAGAGAAAGAGTGGTTTCTCTTTCTCAGAAAGAAAATGAAGATAAATCATTGGAAATGGAAACTTCTTGTAGTGGTTACTCTGAAGATATTATTCATGAAGCTTGTGCTTGTTATCACCATGCTTTTTCTGAAAGCCCTTTTCGTTTTGTTCTTCAAACTAGTCCTTGTTCCGGTAGCCGCACGCCGGAGTTAGCGTCGCCGAGTCGTCACATAATAGAGGACAAAGAAAGCAATGAAGGTGAGATTCTCAATCAATTCAAGTCAGGGGAAGAAGAGGAAGAAGATAAGGAACAGTGTAGTCCAGTCTGTGTTTTAGACCCACCATTTAAGGACGATGACGACGAAGGACATATAAACGATGAAGATGAAGATGATGATGATGATGATGGTGGTGATTTTGATTTGGAGAGCAGTTATGCCATTGTTCAGAGAGCAAGGCAGCAGATATTGTACAAGCTTAGCCGATTTGAGAAACTCGCGGAGTTGGATCCATTAGAACTTGAAAAAAGAATGTTGGAGGAACAAGAGGACGAGGACGAGGATGAAACATATATGGAAGAGGATGATGTTGAAGATGAGGAAATGGATGATGTATCATGTGAACAAAATGATTTCAAACATTTGGTTTTTGAAGCTGTCTATCTGTCAATGGTCCATGACAGACAGAAAATTCCACAAGAGTTTAAGAAACTGATTTCTGATCTTATTTTGGAAGAAGAAAGAGAATTTAACTCTTTAGAAGAGAGAGACATAGTGATAACTAAGATATGCAAGAGGCTAGAATCATGGAAAGAAGTGGAGTCAAACACAATTGATATGATGATAGAAGAGGATTTTTCTGTAGAGGATGAAGGGTGGAAGAAAAATGTTGAACAGATAAGGAATATGGCTTGTGAGCTTGAGTTTGCTATCTTTAGCATTTTGGTGGAGGAATTTTCAGATGAATTAGTATGTTAA 1431 0.3634 MAQKYLHELLKEDQEPFFLNNYISDKRNQMKITTTLQLNKKPINSKFNINLCKNTSCFFSFPQTPDFKKSPLFELTSPVKSPCKIPSRTATLLLEAALRIHKHSSSSSSNHKTKNKGFGLFGSLFKKLKQRNQNRKLELETENVSVKDILKWDSSVKRRERVVSLSQKENEDKSLEMETSCSGYSEDIIHEACACYHHAFSESPFRFVLQTSPCSGSRTPELASPSRHIIEDKESNEGEILNQFKSGEEEEEDKEQCSPVCVLDPPFKDDDDEGHINDEDEDDDDDDGGDFDLESSYAIVQRARQQILYKLSRFEKLAELDPLELEKRMLEEQEDEDEDETYMEEDDVEDEEMDDVSCEQNDFKHLVFEAVYLSMVHDRQKIPQEFKKLISDLILEEEREFNSLEERDIVITKICKRLESWKEVESNTIDMMIEEDFSVEDEGWKKNVEQIRNMACELEFAIFSILVEEFSDELVC* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0769 476 MobiDBLite consensus disorder prediction 330 355 - -
Tpr6g0769 476 MobiDBLite consensus disorder prediction 216 237 - -
Tpr6g0769 476 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 476 - -
Tpr6g0769 476 PANTHER OS04G0572500 PROTEIN 1 476 - -
Tpr6g0769 476 Coils Coil 320 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0769 Tpr-Chr6 6473366 6476770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0769 2 268 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 39.091 1.64e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0769 - - cam:101499859 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0769 6 6473366 6476770 Tpr6g0769 6 6473366 6476770 ECH
Tpr6g0769 6 6473366 6476770 Tpr1g4163 1 48175676 48181273 PCT