Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0768 ATGAATAACCAAGTTCGTGGTGAGGTCGTTGGTGACGCTGATGGTGCTGTTAGTGGCGAAGTTCGTGGTGAAGTCGTTGGTCACGCTGATGGTGCTGTTAGTGGCGAAGTTCGTGGTGAAGTCGTTGGTGACGCTGATGGTGCTGTTAGTGGCGAAGTTCGTGGTGCCGTCGACGGTGGTGTTGCTGGTGTCAGTTCAGCGCGCGATGAAGTAATGGATGCTTACTTTCAAACATTGAACGAGTTAACACAAGAGAATCCTTCTTATAGAGAACATTGTAGAGGTGATGAGGATAATATTGGAGACAATGACATTGGGTTTGATGCAGAAGATGACAATGTTGGTCACTCTGCAGATCATGATTATAATGATTATGAGGAAGATGATGAAAGCTTGGGGGGTGAACTTGACGGTGATGAAAGTTATTCTGATACCGACAATGAGTGGGAACATTTGGATGAAAGTGGGAACACGGTTGCCAACGATTTGGATGAAAATTCAGATACCGACAATGAGTGGACACATTTGGATGAAAATGCAGAGCAATTAGTCATAATTGATGGTGAGGAGGATGTTGTAAAGATTGATATGTTTAACTTGCACAATGAAGACGTTTCTAAGTTGCGATTTGGTAATTTGGAAGTTGCATACAAATTTTACTGTTGGTTTGCAAAGATGAACGGTTTTGCTGTTCGCAAAGGGCAAGATGTTAGAAATAAAGATGGAGTTCTTGTTCAAAAAACATTCGTTTGTAACCTAGAAGGCTACAGGAAAGACCGTCGCGATTTAACTGAAGTGACGCGCAAGCGTGGTCCGAAACACGAAACCAGGTGTGGTTGCAGTGCAAGACTTCGAGTGCATATTGATATAATTTCGGGTCTCTGGTACATTACTATTTTCAGTTTTGAGCACAATCATTATATGTTGACGGAGAAGCACTGTGGGCTATTGGCAGCACATAGGAAACTTACAAAATCAGATCAGATTCAAATTAAGAACTATGGTCAAGCTGGGATAAAGGTTGCTCAAATGATCGGTGCGTTTGCCAATGCTGCGGGAGGGTATGATAAGGTAGGGTTTTTGAAGAAGGATTTGCACAATCAAATTCAAAGACAAAGAAAAGAAACGTCTTCTGATGCTAAAGGTGCTGTTAAGTACCTTCTAGGTCTTAGGACTAAAGATCCATTGATGTTCGTTGCACACACGGTCGATGCTTGTGGTAGGTTGCAAAGCTTATTTTGGTGTGATGGAGAAAGCCAAAAGAATTATGAGGTTTTTGGTGATGTGTTGGCATTCGATGCTACATATAACAAAAATAAATACAGGTGCCCGTTTGTTGTATTTTCCGGTGTCAACCACCATAATCAGACAATTATCTTTGCCACTGCTGTAGTTTCTAATGAGGTTGAAGGCACATATGTGTGGTTGTTGGAGCAATTTTTGCTTGCGATGAAAGGCAAGGCCCCTGTTTCTGTAATAACAGACGGTGATGTAGCTATGAGGAATGCAATAAGGAGAGTATGTCCTAATAGTTATCATAGGTTATGTGCTTGGCATCTTCTTCGAAATGCCATGTCTAACATTGGTAACCTAGAGTTCATTCCATACTTGAAAAAATGCATGCTTGGCGATAACGATGTTTGGAAATTTGAGAAACTGTGGAATGAAATGATAGATAAGTTTGGGCTTCAAGACAACAGTTGGATCAAAGAATTGTACCAGAAAAAGAAGATGTGGTCAACAGCCCATATTAGGGGGCATTTTTTTGCAGGAATACGAACGACGTCGCGGTGTGAAGCATTTCACAGTCACATGGGTCAGTTTGTCCACTCAAAGATGAATATGACTGATTTTGTGAAGCAGTTTAATAGATGTGTATGTTATTTTCGCTTCAGGGAGGTGGAGGCGGATTTTCATTCACAATATGGAAATGCTGTCTTGCAGACCCCTCTAAGGTCACTCGAGAGGTCTGCATCAAAACAATTCACACATGAGATTTTCTGCTTGGTACGTTCTGTACTAAAAAAGGTTTCCCTGATATCATTATGTGACACTCAAGAGATGGCATCCTTTTCAATTTATTCTGTGACGAAGTATCAAGACGAAGGACATGTTTGCCGTGTATCTCACAGTCCATCAAACAATGAATTTAAATGTTCTTGTCTTAGAATGGAATCAATTGGAATTCCTTGTGAACACATCGTGGCAATTATGGTATATCTTGATACTGTTGAATTCCCGACTAATCTTGTGTTGAATCGATGGTCTAAATTTGCAAAGGACTCAATTCGTGGTAATGTTAACGATGGTTCACATTACTGGGATTCACATTTGGTTGCGAGACATGCCAATTTGGTGCATCTTAGCAAGGAAGTTTCCGATTTGGCTTACAAGGATGTTGATGATTATAAAAACTATTTGGATTATCTAACCAATGAAATCACGAGGCTTAAATCAAAGTACGTTGGTGATAACGGTCCTGTGAATTTAAATGGTCCGGTCGAAGTTGATAACATATTGAACCCTTCCTGTGCAAGAAGCAAAGGCGGTGGACCCAGTTCCAACAACACTACAGCTGGGAGAAGCAGGCGTCCAGGAACATGTGGCGGATGCTCCCAAGTTGGACACAACATAAGATCTTGTCCTAACCTGGCTGAAGATGGAGAATTTCCTGCAGCCAGTTCTGTTCAATCAATGTCTGTACGGTTAAGCGGTAACAATTACGAAGGCTACGTCAACACCAGATAG 2748 0.4134 MNNQVRGEVVGDADGAVSGEVRGEVVGHADGAVSGEVRGEVVGDADGAVSGEVRGAVDGGVAGVSSARDEVMDAYFQTLNELTQENPSYREHCRGDEDNIGDNDIGFDAEDDNVGHSADHDYNDYEEDDESLGGELDGDESYSDTDNEWEHLDESGNTVANDLDENSDTDNEWTHLDENAEQLVIIDGEEDVVKIDMFNLHNEDVSKLRFGNLEVAYKFYCWFAKMNGFAVRKGQDVRNKDGVLVQKTFVCNLEGYRKDRRDLTEVTRKRGPKHETRCGCSARLRVHIDIISGLWYITIFSFEHNHYMLTEKHCGLLAAHRKLTKSDQIQIKNYGQAGIKVAQMIGAFANAAGGYDKVGFLKKDLHNQIQRQRKETSSDAKGAVKYLLGLRTKDPLMFVAHTVDACGRLQSLFWCDGESQKNYEVFGDVLAFDATYNKNKYRCPFVVFSGVNHHNQTIIFATAVVSNEVEGTYVWLLEQFLLAMKGKAPVSVITDGDVAMRNAIRRVCPNSYHRLCAWHLLRNAMSNIGNLEFIPYLKKCMLGDNDVWKFEKLWNEMIDKFGLQDNSWIKELYQKKKMWSTAHIRGHFFAGIRTTSRCEAFHSHMGQFVHSKMNMTDFVKQFNRCVCYFRFREVEADFHSQYGNAVLQTPLRSLERSASKQFTHEIFCLVRSVLKKVSLISLCDTQEMASFSIYSVTKYQDEGHVCRVSHSPSNNEFKCSCLRMESIGIPCEHIVAIMVYLDTVEFPTNLVLNRWSKFAKDSIRGNVNDGSHYWDSHLVARHANLVHLSKEVSDLAYKDVDDYKNYLDYLTNEITRLKSKYVGDNGPVNLNGPVEVDNILNPSCARSKGGGPSSNNTTAGRSRRPGTCGGCSQVGHNIRSCPNLAEDGEFPAASSVQSMSVRLSGNNYEGYVNTR* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0768 915 ProSiteProfiles Zinc finger SWIM-type profile. 694 742 IPR007527 GO:0008270
Tpr6g0768 915 MobiDBLite consensus disorder prediction 125 145 - -
Tpr6g0768 915 Pfam SWIM zinc finger 718 738 IPR007527 GO:0008270
Tpr6g0768 915 Pfam FAR1 DNA-binding domain 218 309 IPR004330 -
Tpr6g0768 915 PANTHER OS02G0262500 PROTEIN 205 815 - -
Tpr6g0768 915 Pfam MULE transposase domain 429 523 IPR018289 -
Tpr6g0768 915 MobiDBLite consensus disorder prediction 847 863 - -
Tpr6g0768 915 MobiDBLite consensus disorder prediction 844 868 - -
Tpr6g0768 915 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 205 815 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0768 Tpr-Chr6 6467337 6470171 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g0768 MULE 9.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0768 - - ccaj:109791994 655.981