Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0764 ATGGACTTTCATCTGAAACAATGGAGAAACCAGCATGAGTCAGAAGAGGAACAACATTCCACAAAGATGCCAAAACTTGTTCTTCACCACCCTGCAGAATCCCATCATCAACAATCTTCTGTTCCTCCTGCACTCCCTTTCCTTGTTCCTCATTCCAACACCAAACTCACCAACTTGTCAGATTCAATAGCATTACCACATTCCAATATCACCAACAGATCATTTCCCAGAATTGGAAGCCATTTTAGCATATCTCAATGGCAAGAACTTGAGTTACAGGCTTTGATATTTAGGTACATGTTAGTTGGTGCTTCTGTTCCTCCTGAACTTCTTCAACCTATCAGGAAAAGTCTTCTTCATTCATCTCCTTACTTTCTTCATCACCCTCTTCAACATTATCAATCCACAGCTTTGTTGCAAGCAGGGTATTGGGGAAGAGGAGCAATGGATCCAGAGCCTGGTCGTTGCCGGAGAACCGACGGTAAAAAGTGGCGGTGTTCGAGGGATGTGGTGACTGGACAGAAGTACTGTGAAAGACATATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTTCCCACACCAACTAGTGCCGGTGGTGGTGGTGGCGGCGGTGGCGGTGGATCTTTCTCTGCTTCACAGTCTCTTGCTACTGCCTCATTGAAATCTCCTTTTAATCTTCTTCATCTCAATGAACGTTCCTATGGGACCAAGAATGAAGACAAAAGCAGCTTATTTGAAAGCGAAGATCATGTGGGTGGGGATGGAAGATCAGGTGGGAAAATGCTAAGACATTTCTTTGACGATTGGCCAAGATCACTACAACAAGAGTCTGACAATGCTGAAAACAACAATGGTGGTGGGTCATCATCCACATGTCTCTCAATTTCAATGCCAGGAGGAAATAACAACACTTCTTCTTCTACTTCAGATATAGTATCATTGAAATTGTCCACTGGCTATGGAGAAGAACCATGCCCAAGAAATGTTAATGTGGGCCTAGAAACTGAGCAACAACAACAACTTCAAGTGAATTGGGTCGGTGGATGGAATTCAGGTAATCAAGTGTCTTCAATGGGAGGACCACTTGCTGAAGCACTTAGATCATCCACGACAACTTCTTCACCTACTAGTGTTTTGCATCAATTGCCACGTTCTTCTGCTTCTGAAACCAGCTACATTAGTGCCTAA 1197 0.4386 MDFHLKQWRNQHESEEEQHSTKMPKLVLHHPAESHHQQSSVPPALPFLVPHSNTKLTNLSDSIALPHSNITNRSFPRIGSHFSISQWQELELQALIFRYMLVGASVPPELLQPIRKSLLHSSPYFLHHPLQHYQSTALLQAGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVTGQKYCERHMHRGRNRSRKPVELPTPTSAGGGGGGGGGGSFSASQSLATASLKSPFNLLHLNERSYGTKNEDKSSLFESEDHVGGDGRSGGKMLRHFFDDWPRSLQQESDNAENNNGGGSSSTCLSISMPGGNNNTSSSTSDIVSLKLSTGYGEEPCPRNVNVGLETEQQQQLQVNWVGGWNSGNQVSSMGGPLAEALRSSTTTSSPTSVLHQLPRSSASETSYISA* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0764 398 ProSiteProfiles QLQ domain profile. 81 116 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tpr6g0764 398 SMART QLQ_2 80 116 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tpr6g0764 398 ProSiteProfiles WRC domain profile. 150 194 IPR014977 -
Tpr6g0764 398 PANTHER - 8 397 IPR031137 GO:0005634|GO:0006351|GO:0032502
Tpr6g0764 398 MobiDBLite consensus disorder prediction 238 259 - -
Tpr6g0764 398 Pfam WRC 151 193 IPR014977 -
Tpr6g0764 398 MobiDBLite consensus disorder prediction 1 22 - -
Tpr6g0764 398 Pfam QLQ 81 115 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tpr6g0764 398 PANTHER GROWTH-REGULATING FACTOR 3 8 397 - -
Tpr6g0764 398 MobiDBLite consensus disorder prediction 359 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0764 Tpr-Chr6 6349399 6353197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0764 1 385 GRF Transcription Factor Family AT3G52910 47.761 5.53e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Tpr6g0764 WRC 5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0764 - - gmx:100814842 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0764 6 6349399 6353197 Tpr6g0764 6 6349399 6353197 ECH