Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0759 ATGGGTTCATTTTCTGGCGCTTGTGAAATAGTTGAAGCAAGAGAGGATTTAAGTAAAGGGAAAGGTGTTGTAGGGATTTGCCAGTCCAATTCTCGATGCAAAACGTCTGAGAAAAATAAGAAGCCTTTGGTGTTGAACCTGGGATACAAGGATTATATTGATGATGATATTAACAAGCTGTTTGAATCATTTTCTCTTAAATCTTCATCAAGGGATTTGGGCATGTCACAAGATGGTACGAGTCATAAGCTGAAAAACACCTTAAAAAAGCCAATGACAATGGGTGTTCCTCGGTCTCCACGAGTTGGAACTTCTGAGGCTGCTAATTTGAAGCAGGCATTGAGAGACCTTTGTATATCTAAGGCCTCAGAAGTGGCTGCTATGAAACGGTTGTCAAAGTCAACAGCTTCTCCAAGAATATCTGAGGTTGGGAGGATACAAACATTGTACAGTTCAGTTGTAGATGAAACTGGTCATTCTGGGCCTTATATTGCTGAGAGTAAAGGGCACAGAAAAGAAATCTCTGTAGTGCCAGAAAAAGGCAAGTCGCCCTTGTTGGATAAAACATCTCAATCTCATCAAACTACCCAAATCACATCATCGAGCCAAGCCATCAATTCTGCTTGGGAAATCGCTGTTGCAACTACTCAACTTGATTCCGGGACTTCATCGATGCAAAGAGATTCAGCATGTTCATCGAGTAAAACTGGGTTTCAATCACGGCACGTGGTACCCGTTCAACCAGAAAAACAAACATCTGCATCTTATCAATCTCTTTATAATGCATCTGAAAGTAAATTAGAGTTGCCTGTACACGCTTCTTCCCCTAAAAAGTTAGGAAATAAAGTGGTTGTGTCCAATACTGGACGGAAAGGTAGGTTGCAGACAGCATCTTCTTCATCTACTTCTGTAAGTGGCACCAAAGTTAACAAACAGCCACACCACTCCCCTCACACAGTTAAAATGGTCATCAAGAACAAGAATCTGAGTAAGAAGAAAGTGAAGGAGGAGGATTCAGGTTCTTCATCATGTGATCCTACATCAAATGAAGTTAGTAAGTCTGTTCCTGGCACAGCTGGACTGATTTGTGAAAGATGTAGGTGTGCTTTAGAAAATACAGGTGAAGAAAAAAACAAAGAGATTATGACCGCGGACTCTACTAGTCCTGGAAATGGAGTGAACTCTGGTTCAAATAAACCTGATTTGGCATCAACTAGCGGTACTATAAACAAAGGCTGCAAAGCAGTTGCAAAGGTGGTGAAGAACACCAAGTTGAAAGAACAACTTGAGTTTTCACAAAGCTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACTAGTACCAGTGATGAGAGCAACATGAGTGGCTCAAGTTTCGGCAGTAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATTCGACGTGCTCAAATGCTGCATGGAGCCTTGGGCTTGAGACATTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGGACTGTTTATCTCGCTGAACTAATTGGCACAAGCTGTTTGTTTGCTATTAAGGTCATGGACATCGAATTTTTGGCAAGGCGGAAGAAGATACCTAGGGCTCAAACTGAAAAAGAAATATTAAGGATGCTGGACCATCCGTTTCTTCCTACCTTGTATGTGCAATTTACATCAGATAATCTCTCATGTTTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCCCGATAGATGTTTCTCGGAGCTAGCAGCAAGGTTTTATGTTGCTGAAGTCCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTATCGTGATTTAAAACCTGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACTGATTTTGATCTGTCGTTGAGGTGTGCTGTTAGCCCAACACTTCTGAAGTCATCTTATGATGTTGAATCTACAAAAATTTCTCGTCTTAGTGCACAATCAAGTTGTATCGAACCATTCTGTATTGAACCATCTTGTCAAGTTACATGCTTCAGCCCCAGATTCCTACCGGCTTCAGCAAAAGCAAGGAAATTAAAAGTTGATCCTGTTGCCCAGGTCAGATCACTGCCACAGCTTGTGGCCGAGCCCACAGATGCAAGATCAAACTCATTTGTTGGTACACACGAATACTTGGCGCCTGAGATCATCAAAGAAGAGGGTCATGGAGCTGCAGTTGACTGGTGGACATTTGGCGTTTTTCTGTATGAGCTTTTATATGGTAGAACACCCTTTAAAGGTTCTAACAATGAAGAAACATTAGCAAACGTGGTATTGCAAAGTCTTAGATTCTCTGATGACCCATTTGTTAGTTTCGAAGCGATGGACCTGATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTTCACAGAGAGGAGCTGCTGAGATTAAAAAACATCCCTTCTTCGAGGGTCTTAACTGGGCCTTAATTCGTTGTGCTACCCCACCAGAACTTCCAGAGTTTTGTGATTTTGAAGTTTTAGACACGGCCTCACAAGGCAAGGGTGCTAAGTATTTAGAGTGTAATGTAGGAGAGCACGTCGAATTCGAGTTGTTTTAA 2616 0.4213 MGSFSGACEIVEAREDLSKGKGVVGICQSNSRCKTSEKNKKPLVLNLGYKDYIDDDINKLFESFSLKSSSRDLGMSQDGTSHKLKNTLKKPMTMGVPRSPRVGTSEAANLKQALRDLCISKASEVAAMKRLSKSTASPRISEVGRIQTLYSSVVDETGHSGPYIAESKGHRKEISVVPEKGKSPLLDKTSQSHQTTQITSSSQAINSAWEIAVATTQLDSGTSSMQRDSACSSSKTGFQSRHVVPVQPEKQTSASYQSLYNASESKLELPVHASSPKKLGNKVVVSNTGRKGRLQTASSSSTSVSGTKVNKQPHHSPHTVKMVIKNKNLSKKKVKEEDSGSSSCDPTSNEVSKSVPGTAGLICERCRCALENTGEEKNKEIMTADSTSPGNGVNSGSNKPDLASTSGTINKGCKAVAKVVKNTKLKEQLEFSQSSKSSQGEYSSSTSTSDESNMSGSSFGSRPHMSKDVRWEAIRRAQMLHGALGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDIEFLARRKKIPRAQTEKEILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQPDRCFSELAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSYDVESTKISRLSAQSSCIEPFCIEPSCQVTCFSPRFLPASAKARKLKVDPVAQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFSDDPFVSFEAMDLIRGLLVKEPENRLGSQRGAAEIKKHPFFEGLNWALIRCATPPELPEFCDFEVLDTASQGKGAKYLECNVGEHVEFELF* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0759 871 MobiDBLite consensus disorder prediction 314 328 - -
Tpr6g0759 871 MobiDBLite consensus disorder prediction 220 250 - -
Tpr6g0759 871 MobiDBLite consensus disorder prediction 180 201 - -
Tpr6g0759 871 Gene3D Transferase(Phosphotransferase) domain 1 714 839 - -
Tpr6g0759 871 Gene3D Transferase(Phosphotransferase) domain 1 573 638 - -
Tpr6g0759 871 SMART serkin_6 489 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0759 871 MobiDBLite consensus disorder prediction 271 354 - -
Tpr6g0759 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Tpr6g0759 871 MobiDBLite consensus disorder prediction 429 463 - -
Tpr6g0759 871 PANTHER FLIPPASE KINASE 1-RELATED 1 871 - -
Tpr6g0759 871 Gene3D Phosphorylase Kinase; domain 1 488 572 - -
Tpr6g0759 871 MobiDBLite consensus disorder prediction 288 313 - -
Tpr6g0759 871 MobiDBLite consensus disorder prediction 379 405 - -
Tpr6g0759 871 Pfam Protein kinase domain 718 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0759 871 Pfam Protein kinase domain 490 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0759 871 MobiDBLite consensus disorder prediction 185 201 - -
Tpr6g0759 871 MobiDBLite consensus disorder prediction 429 462 - -
Tpr6g0759 871 CDD STKc_phototropin_like 487 839 - -
Tpr6g0759 871 SUPERFAMILY Protein kinase-like (PK-like) 466 840 IPR011009 -
Tpr6g0759 871 MobiDBLite consensus disorder prediction 383 405 - -
Tpr6g0759 871 ProSiteProfiles Protein kinase domain profile. 489 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0759 871 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0759 Tpr-Chr6 6290571 6295690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0759 1 871 AGC Kinase Gene Family AT3G52890 50.313 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr6g0759 Pkinase 7.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0759 - K08286 mtr:MTR_7g104180 1357.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0759 6 6290571 6295690 Tpr1g4160 1 48114707 48119907 ECH
Tpr6g0759 6 6290571 6295690 Tpr6g0759 6 6290571 6295690 ECH
Tpr6g0759 6 6290571 6295690 Tpr1g4160 1 48114707 48119907 PCT