Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0756 ATGGATTTCTTTCCCTTTCTACTCTCTCTAATTTTCCTTATGTTACATCTCTCAGGACAAAGGGTGGTAGAAGCTGAAACTGATCATAATATAACAAAATTATTTGTTTTTGGAGATTCATATGCTGACACAGGAAATATCAAAAGAGGTTTGGCCAGTTCTTGGAAACATCCTTATGGTGTCACCTTTCCCGGCAAACCTGCCGGCCGTTTCTCCGACGGCAGAGTCCTCACCGACTACATTGCCCAGTATTTGAAAATGAAATCACCAATCTCATACAGAGTGAGAAAATATGCTATGCCACACCATTTGAAATATGGAATGAACTTTGCATTTGGTGGTACTGGTGTGTTTGAAACGTTGAATCCAGGCCCAAACATGACCACCCAGATTGATTTTTTTGAAGGAGCCCTAAAAGACAAATTGTACACAACTGAAGATATCAATAATTCAGTTGCTCTTGTCTCTGTCGCTGGTAATGACTACACTCGTTACACAGTAAAAAATGGCTCTATTCAGGGTTTACCATCATTCATAGAATCACTGATTAATCAAACAATCACAAATATAATTCGCATCAAAGGATTAGGAGTGAAGAAAGTGATTATATCTAATCTACAACCAGTTGGATGTCTACCTTCAACGACAGCTTCAAACTCATTCAAACAATGTAATGAAACATCAAACAATCTCCTAGCACTTTACCATAACACACTCTTAACTCAAGCAGTGACCAAATTAAACCAACAAACAAAAGATCATAATTCGTCGCCCTTTTTAGTTCTTAATCTTTACGATAGTTTTATGTCGGTGTTGAATCATCCATCTACACATAACATTAAGGATAAGTTGAAGCCATGTTGTGTTGGAGTTAGTAATGAGTATTCATGTGGAAGTGTTGATGAGAATAATGTTAAGAAATATTTGGTTTGTGAGAAACCAAAATCTGCTTTCTTTTGGGATTTGGTTCATCCTACTGAGGCAGGGTGGCATGCTGTGTATAACAAGCTACGAGTCATGAATGTTCTTCAACAGATTCATTATTAG 1047 0.3725 MDFFPFLLSLIFLMLHLSGQRVVEAETDHNITKLFVFGDSYADTGNIKRGLASSWKHPYGVTFPGKPAGRFSDGRVLTDYIAQYLKMKSPISYRVRKYAMPHHLKYGMNFAFGGTGVFETLNPGPNMTTQIDFFEGALKDKLYTTEDINNSVALVSVAGNDYTRYTVKNGSIQGLPSFIESLINQTITNIIRIKGLGVKKVIISNLQPVGCLPSTTASNSFKQCNETSNNLLALYHNTLLTQAVTKLNQQTKDHNSSPFLVLNLYDSFMSVLNHPSTHNIKDKLKPCCVGVSNEYSCGSVDENNVKKYLVCEKPKSAFFWDLVHPTEAGWHAVYNKLRVMNVLQQIHY* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0756 348 CDD SGNH_plant_lipase_like 34 337 IPR035669 -
Tpr6g0756 348 SUPERFAMILY SGNH hydrolase 33 337 - -
Tpr6g0756 348 Pfam GDSL-like Lipase/Acylhydrolase 34 336 IPR001087 GO:0016788
Tpr6g0756 348 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 348 - -
Tpr6g0756 348 PANTHER OSJNBB0059K02.9 PROTEIN 6 348 - -
Tpr6g0756 348 Gene3D SGNH hydrolase 20 344 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0756 Tpr-Chr6 6270523 6274870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0756 25 333 Pollen Coat Proteome AT1G75930 26.606 3.26e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0756 - - gmx:100788092 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0756 6 6270523 6274870 Tpr1g4316 1 50261413 50267123 PCT