Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0753 ATGGCGGAAGAGCACCGATGTGAAACCCCAGAAGGTCACAGACTCTGCGCTAACAACTGCGGATTCTTCGGTAGTTCAGCTACGATGAATCTCTGCTCAAAATGTTACAGAGATATTCATTTGAAGGAGCAAGAACAAGCCAAAACCAAATCAACGATCGAAACCGCTCTTTCATCAGCCTCCACTTCAACCGCCGTGGTTGTTGCATCTCCGGTACCGGAAATCGAATCTCTCCCTCAAACTCAACAACCGGCGTTGACTAAACCGTCGATCGTGCCTGATGAATCGGATTCATCGATCGGATCGGTTCAACCGAATCGATGCGGAACGTGTAGGAAACGGGTCGGGTTAACCGGATTCAAGTGTAGATGTGGAAGCACGTTTTGTGGGACCCACAGGTATCCAGAGAAACACGAGTGCGGTTACGATTTCAAAGCCATCGGGAGAGACGAGATAGCGAAAGCGAATCCTGTGATCAAAGCTGATAAGCTGAGAAGAATTTGA 504 0.4861 MAEEHRCETPEGHRLCANNCGFFGSSATMNLCSKCYRDIHLKEQEQAKTKSTIETALSSASTSTAVVVASPVPEIESLPQTQQPALTKPSIVPDESDSSIGSVQPNRCGTCRKRVGLTGFKCRCGSTFCGTHRYPEKHECGYDFKAIGRDEIAKANPVIKADKLRRI* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0753 167 SUPERFAMILY AN1-like Zinc finger 96 162 IPR035896 -
Tpr6g0753 167 SMART AN1_Zf_4 108 145 IPR000058 GO:0008270
Tpr6g0753 167 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Tpr6g0753 167 Gene3D - 76 163 IPR035896 -
Tpr6g0753 167 Pfam AN1-like Zinc finger 108 144 IPR000058 GO:0008270
Tpr6g0753 167 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 167 - -
Tpr6g0753 167 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Tpr6g0753 167 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Tpr6g0753 167 ProSiteProfiles Zinc finger AN1-type profile. 102 148 IPR000058 GO:0008270
Tpr6g0753 167 Gene3D - 1 63 - -
Tpr6g0753 167 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 6 1 167 - -
Tpr6g0753 167 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0753 Tpr-Chr6 6238194 6239660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0753 1 167 C2H2 Transcription Factor Family AT3G52800 54.118 1.09e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0753 - - gmx:100527251 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0753 6 6238194 6239660 Tpr6g0753 6 6238194 6239660 ECH
Tpr6g0753 6 6238194 6239660 Tpr1g4319 1 50294772 50296070 PCT