Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0713 ATGACAATTAGCCACTACAAAAATAACATTTCAAATAGAAAAAAAATGGAAAATATGGCACCGGGTTATCGTTTCTACCCTACAGAAGAAGAGCTTATTTCATTCTATCTTCACAATATGCTTGAAGGAGATCAGAAAAAATATATGATTTGTAGTGTTATACCGGTTGTTAATATATACGATTATAATCCATCGCAACTCCCACAAATTTCAGGAGAGGCTAGTATGAGTGACAAGGAGCAATGGTTCTTTTTCATTCCAAGGCAAGAAAGTGAAGTGAGAGGAGGAAGGCCAAGACGTCTCACAACAACCGGGTATTGGAAAGCCACCGGATCTCCTAATCATGTTTATTCTTCCGATAATCGCGTCATTGGCATGAAAAGAACTATGGTTTTCTATTGTGGAAGAGCTCCAAATGGAAAGAAAACTGATTGGAAAATGAATGAGTATAAGGCCATTCAATTAGATCACGAAGCATCCTCTTCAAATAAATTAGAACCTAAGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAGAAATCAAAGTGCTTGAGAGCATTTGATAGAAGACCAGCACCAAGGAGGGTTACACCACTTGTTCAAAATGCTCAAGAGCACCAAAAGGATTCAATATGCGATAATGATGTTCAAATGTTGATGGGGATAAGTGCAACAAGTTCACCAGAGAGTTCTTCCTCTATAGAGCATCATGGCCAACCCTCACAAGAGGTAGGAGAGGCTAGCCAAATGGATATTAGTGTTAATTATGAGCCTTTGTTGGATTGGGAGAGTGTGAATTGGTTCTTGGAATCCGGGCAATGA 825 0.3891 MTISHYKNNISNRKKMENMAPGYRFYPTEEELISFYLHNMLEGDQKKYMICSVIPVVNIYDYNPSQLPQISGEASMSDKEQWFFFIPRQESEVRGGRPRRLTTTGYWKATGSPNHVYSSDNRVIGMKRTMVFYCGRAPNGKKTDWKMNEYKAIQLDHEASSSNKLEPKLRQEFSLCRVYKKSKCLRAFDRRPAPRRVTPLVQNAQEHQKDSICDNDVQMLMGISATSSPESSSSIEHHGQPSQEVGEASQMDISVNYEPLLDWESVNWFLESGQ* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0713 274 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 269 - -
Tpr6g0713 274 ProSiteProfiles NAC domain profile. 19 181 IPR003441 GO:0003677|GO:0006355
Tpr6g0713 274 MobiDBLite consensus disorder prediction 225 247 - -
Tpr6g0713 274 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 19 269 - -
Tpr6g0713 274 SUPERFAMILY NAC domain 8 181 IPR036093 GO:0003677|GO:0006355
Tpr6g0713 274 Gene3D NAC domain 28 185 IPR036093 GO:0003677|GO:0006355
Tpr6g0713 274 Pfam No apical meristem (NAM) protein 21 151 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0713 Tpr-Chr6 5891168 5893902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0713 22 268 NAC Transcription Factor Family AT5G22380 47.244 3.07e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr6g0713 NAM 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0713 - - lang:109348309 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0713 6 5891168 5893902 Tpr6g0713 6 5891168 5893902 ECH