Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0689 ATGTCTAGCTCCAGAAAGAAGCTTCTTCTGAACACTGTGTCGGTGAAACTAGGCTGTGGAAGTTGCAGAAAGCTAAAGTTAAGTAACATATTCAACCCAAAACCAAAACCCAAGAACCCCACTTACCAAAAACACAAACTTTACAATAACCAGTACTCCTCTTCCTCAGGTCCTTGGAGTAGTACTGAAGACAAATATGACAGTACAAGCACCCCAAATACCACCACTACTACCAACACTGCCACCACATTTTCACCTTTGTATCAATCAAACTTTTCTGATTCAGAAACCTATGCAAAGGACCAGAGAAGAGTAGGAGGTTTAGGCAGAGCTGGAGGAGAAGGTGTTGCTGTGGAGAAAGATTCTGAAGACCCTTATCTTGATTTCAGACATTCCATGCTTCAAATGATATTGGAGAATGAAATATACTCAAAAGATGATCTTAGAGAGCTTCTGAATTGCTTTCTTCAGCTGAATGAACCTTATCACCATGGTGTTATAGTCAGAGCTTTTACTGAGATTTGGAATGGTGTCTCTTTGAGGCCTAGTTCATCGAGGGTTCATACAACTCGGACCCGTAAGCCACGCAGACATTAA 597 0.4137 MSSSRKKLLLNTVSVKLGCGSCRKLKLSNIFNPKPKPKNPTYQKHKLYNNQYSSSSGPWSSTEDKYDSTSTPNTTTTTNTATTFSPLYQSNFSDSETYAKDQRRVGGLGRAGGEGVAVEKDSEDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNEPYHHGVIVRAFTEIWNGVSLRPSSSRVHTTRTRKPRRH* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0689 198 Pfam Transcriptional repressor, ovate 122 177 IPR006458 -
Tpr6g0689 198 MobiDBLite consensus disorder prediction 43 82 - -
Tpr6g0689 198 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 183 IPR038933 GO:0045892
Tpr6g0689 198 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 116 176 IPR006458 -
Tpr6g0689 198 ProSiteProfiles OVATE domain profile. 118 177 IPR006458 -
Tpr6g0689 198 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 183 - -
Tpr6g0689 198 MobiDBLite consensus disorder prediction 30 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0689 Tpr-Chr6 5694977 5695946 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr6g0689 Ovate 1.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0689 - - mtr:MTR_7g105790 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0689 6 5694977 5695946 Tpr6g0689 6 5694977 5695946 ECH