Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0681 ATGCATGAGAAACAACAATTGAACGGAGCCTACTACGGCCCATCAATCCCACCACCAAAATCCTACCACCGTCCATCACGCGGCGGCGGTTTCGACTGTTGCTGTGGCTGTCTCTTCAACCTCATCTTCAAACTAATCCTCACCGTCATAATAATCGTCGGCATCGTTGTCTTCCTCTTCTGGCTCATAGTTCGTCCCAACGTTGTCAAAGTTCATGTCACAGATGCAACTCTCACACAATTCAACTACACAAACAACAACAACAACCTTAACTATGATCTCTCTTTAAACATCACAATTCGTAATCCAAACAAAAAACTAGGAATTTACTATGATTCCATCGAAGCTAGAGCATTGTACCATGATGTTAGAGTTGACTCTGTTTTTCTTGACCCATTTTATCAGGGACATAAAAGTACTAACTTGTTGAATCCTTCGTTTAAGGGTCAGAAAGTGATTGTTCTTGGTGCTGATCAGAGTTTGGATTTGAGTAAAGAAAAGGATGCAGGTGCTTATGAGATTGTTGTGAAGATGTATCTTAGAGTGAGGTTTAAATTTGGTGCGTTTAAGACAAGGAAGATGAAGCCAAAGATTACATGTGAGTTGCGTATTCCTTTGAAATCTGCCGGAGGTTCATCGGCCGGTGGTGGTTTTGAGGCTACCAAATGTGATTGGGATCGTTGA 684 0.4181 MHEKQQLNGAYYGPSIPPPKSYHRPSRGGGFDCCCGCLFNLIFKLILTVIIIVGIVVFLFWLIVRPNVVKVHVTDATLTQFNYTNNNNNLNYDLSLNITIRNPNKKLGIYYDSIEARALYHDVRVDSVFLDPFYQGHKSTNLLNPSFKGQKVIVLGADQSLDLSKEKDAGAYEIVVKMYLRVRFKFGAFKTRKMKPKITCELRIPLKSAGGSSAGGGFEATKCDWDR* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0681 227 PANTHER OS05G0367900 PROTEIN 25 225 IPR044839 GO:0098542
Tpr6g0681 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 25 225 - -
Tpr6g0681 227 Pfam Late embryogenesis abundant protein 97 200 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0681 Tpr-Chr6 5638943 5640100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0681 63 216 SNARE and Associated Proteins AT1G32270 39.610 6.61e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0681 - - gmx:100793187 295.049