Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0680 ATGGCCGATAACAAACAACCACAATTGAACGGTGCCTACTATGGCCCTGCCATTCCACCACCGGCACAACCCCGCTACAGCCATCACCGAAGTAGAAGCTGTTGTTCATGTCTCTTCGGTTTCCTTTGGAAGCTCCTAGTCGCACTCATCGTTCTAGCTGGCCTCGCAGTTCTTATCTTCTATCTCGTTGTTCAACCACGCTCCTTCAAATTCTATGTCACGGAAGCTAATCTAAATAAATTCGAATACACAAACAACACATTACACTATGATATGGTGCTCAACTTCACTGCCCGGAATCCAAACAAAAAGCTCAGTATCTACTACGACAAAGTGGAGGCTCGAGCATTCTACGAAGGGGAAAGGTTTGCAAATGTCGATGTGATCACACATATGAACTCGTTTCGCCAATACAAGAAAAGCAGCGATCCCATGAGCGGTGTTTTCTCGGGACAACAGTTGTTAATGCTAGACAATGGTCAAGTCTCTGAGTTCAACGAAGATAAGAATATTGGAGTTTATGATATCTATGTGAAGCTCTACTTCAGAATTAGGTTTAGACTCGGGGATTTGATATCGGGTAATTACAAGCCCAAGGTGAAATGTCACCTCAAAGTTCCATTGACTTCGAACAATACCACCGCAACCTTCACTCGACTTGTGCCTACCAAGTGCGATGTTGATTTCTACTAA 693 0.4401 MADNKQPQLNGAYYGPAIPPPAQPRYSHHRSRSCCSCLFGFLWKLLVALIVLAGLAVLIFYLVVQPRSFKFYVTEANLNKFEYTNNTLHYDMVLNFTARNPNKKLSIYYDKVEARAFYEGERFANVDVITHMNSFRQYKKSSDPMSGVFSGQQLLMLDNGQVSEFNEDKNIGVYDIYVKLYFRIRFRLGDLISGNYKPKVKCHLKVPLTSNNTTATFTRLVPTKCDVDFY* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0680 230 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 227 - -
Tpr6g0680 230 Pfam Late embryogenesis abundant protein 96 197 IPR004864 -
Tpr6g0680 230 PANTHER OS05G0367900 PROTEIN 21 227 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0680 Tpr-Chr6 5622244 5623340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0680 63 221 SNARE and Associated Proteins AT1G32270 33.333 7.47e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0680 - - gmx:100807701 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0680 6 5622244 5623340 Tpr1g4388 1 51273596 51274784 PCT