Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0679 ATGGCTGATAACAAGCAACCACAATTAAATGGCGCCTACTATGGCCCCGCGATTCCACCACCAGCACAACCCCGCTACAGCCATCACCGAAGTAGAAGTTGTTGTTCATGTCTCTTCGGTTTCCTTTGGAAGCTCGTTGTCGCACTCATCGTTCTTGCTGGCCTTGCAGTCCTTATCTTCTATCTCGTTGTTCAACCACGCTCCTTCAAATTCTATGTCACGGAAGCCAATTTAACTAAATTTGACTATACAAACAACACATTACACTATAATATGGTGCTCAACTTCACTGCCCGCAACCCAAACAAAAAGCTTAGCATCTACTACGACAATGTGGAGGCTCGGGCATTCTATGAAGGGGAAAGGTTTGCAAATGTTGATGTGAAAGCCCAGTTTCGCCAATATAAGAAAAGCAGTAACCCCATGAGCGGTGTTTTCTCGGGACAAAATTTGTTGTTGCTCAACAATGATCAAGCCTCTGAGTTCAACAAAGATAAGAATGTTGGAGTTTATGATATCTATGTGAAACTCTACTTCAGAATTAGGTTTAGACTCGGGGATTTGATATCAGGTGATTACAAGCCTAAGGTGAAATGTCACCTCAAAGTTCCGTTGACTTCGAACAATACCACGGCAACCTTCACTCCACTTGTGCCTACCAAGTGCGATGTTGATTTCTACTAA 684 0.4327 MADNKQPQLNGAYYGPAIPPPAQPRYSHHRSRSCCSCLFGFLWKLVVALIVLAGLAVLIFYLVVQPRSFKFYVTEANLTKFDYTNNTLHYNMVLNFTARNPNKKLSIYYDNVEARAFYEGERFANVDVKAQFRQYKKSSNPMSGVFSGQNLLLLNNDQASEFNKDKNVGVYDIYVKLYFRIRFRLGDLISGDYKPKVKCHLKVPLTSNNTTATFTPLVPTKCDVDFY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0679 227 Pfam Late embryogenesis abundant protein 96 195 IPR004864 -
Tpr6g0679 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 224 - -
Tpr6g0679 227 PANTHER OS05G0367900 PROTEIN 21 224 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0679 Tpr-Chr6 5618852 5619808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0679 63 218 SNARE and Associated Proteins AT1G32270 35.220 8.89e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0679 - - gmx:100807701 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0679 6 5618852 5619808 Tpr1g4389 1 51290831 51291705 PCT