Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0678 ATGCAACCCCAATTGAACGATTCATACTATGGACCGGCCATTCCACCGACGGGAGGACAATCTCGCAAACGCAACCACCGACGTAAAAATGGTTGCGGTTGTCTCTTTAGCATTCTATGGAAGCTTCTACTTGCACTGGTCGTCCTTTTTGGTCTTACCATTCTTATCTTCTATCTTATTGTTCAACCTCGCCCCTTCAAGTTCTATGTAGCAAAAGCCGAACTAACCCAATTTGATTACACCAACAACACACTACACTACAACATGGTGCTCAACTTCACAGCCCACAACCCAAATAAAAAACTCAGTATCTACTACGATAAAGTTGAAGCACAAGCATCATATGAAGGGTCGAGGTTTGCTAATGTAGATGTGATCACACACATGAAGTCATTTCGCCAAAACAAGAAAAGTAGTAACCCCATGAGTGGCGTTTTCTCAGGACATAAATTGTTGGTGCTTAACAATGATCAAATCTCTAAATTTAACAAAGATAAGAATGTCAGAATTTATGATATCTATGTAAAACTCTACTTCAAGATTAGGTTCAAACTCGGAGACTCGATAACTCGTACGTATAAACCTAAGGTCAAATGTGACCTCACTATTCCTTTGAGAACCGGCTATGAAACTAACTTTACCTTCATTCGACTCATACCCACCAAGTGCAGTGTTGAGTTCTAG 684 0.4035 MQPQLNDSYYGPAIPPTGGQSRKRNHRRKNGCGCLFSILWKLLLALVVLFGLTILIFYLIVQPRPFKFYVAKAELTQFDYTNNTLHYNMVLNFTAHNPNKKLSIYYDKVEAQASYEGSRFANVDVITHMKSFRQNKKSSNPMSGVFSGHKLLVLNNDQISKFNKDKNVRIYDIYVKLYFKIRFKLGDSITRTYKPKVKCDLTIPLRTGYETNFTFIRLIPTKCSVEF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0678 227 PANTHER OS05G0367900 PROTEIN 21 225 IPR044839 GO:0098542
Tpr6g0678 227 Pfam Late embryogenesis abundant protein 93 199 IPR004864 -
Tpr6g0678 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0678 Tpr-Chr6 5615105 5615881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0678 60 208 SNARE and Associated Proteins AT1G32270 34.000 3.40e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0678 - - gmx:100807701 290.426