Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0677 ATGGCTGATAACAAGCAACCACAATTAAACGGTGCATACTATGGCCCTGCGATTCCACCGCCAACAACACAACCCCGCTACAGCCCCAACAGCTATTGCCACCACCGTGATAGAAGTTGTTGTAGCCATCTCTTCGGGATCTTCTGGAAGCTTCTAATTGCACTTATTGTTCTCTTCGGTCTCGTAATCCTTATCTTCTATCTTATTGTTCAGCCTCGCGTCTTTAAGTTTTATGTGACGGAAGCTAAGCTAACCCAATTTGACTATATCAACAACACACTACATTACAACATGGTGCTCAACTTTACGGTCCATAACTCAAACAAAAAACACGGCATCTATTACGATAAAGTGGAGACTCGAGCATTTTATCAAGGGTCAAGGTTTGCAAATGTCGATGTGATCACACACATGAACTCATTCTGCCAATATAAGAGGAGTAGTGATCCCATGAGTGGCGTTTTCTCAGGACAACGACTAATGTGTTCTACAAGACACACTGAGAAGGCCAAATCAGGTCTTGTTGCTAGCAAATACATTAGGCTACCAACTATCTGCTTGTATCTTTTCTCTTCACTTGCTTTTCCTCTCAACAATGATCAAATATTTGAATTCAACAAAGACAAGAGTCTTGGGGTTTATGATATCGATAAAAGTCACGGAATTTATGATATCCATGTGAAACTTTACTTTAAAATTAGGTTTAGACACGGAGATACAATTTCTCGCAAGTATAAACTCAAGGTGAAATGTGACCTCAATGTTCCATTGAGCTCTAGTAATAATGAAACATTTACATTTAGTAATTGGGTTTTACCCAACAAGTGCAAAGTTGTGTTCTAG 843 0.395 MADNKQPQLNGAYYGPAIPPPTTQPRYSPNSYCHHRDRSCCSHLFGIFWKLLIALIVLFGLVILIFYLIVQPRVFKFYVTEAKLTQFDYINNTLHYNMVLNFTVHNSNKKHGIYYDKVETRAFYQGSRFANVDVITHMNSFCQYKRSSDPMSGVFSGQRLMCSTRHTEKAKSGLVASKYIRLPTICLYLFSSLAFPLNNDQIFEFNKDKSLGVYDIDKSHGIYDIHVKLYFKIRFRHGDTISRKYKLKVKCDLNVPLSSSNNETFTFSNWVLPNKCKVVF* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0677 280 PANTHER OS05G0367900 PROTEIN 27 162 IPR044839 GO:0098542
Tpr6g0677 280 PANTHER OS05G0367900 PROTEIN 217 277 IPR044839 GO:0098542
Tpr6g0677 280 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 217 277 - -
Tpr6g0677 280 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 27 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0677 Tpr-Chr6 5602445 5611943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0677 69 264 SNARE and Associated Proteins AT1G32270 25.253 2.58e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0677 - - gmx:100795302 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0677 6 5602445 5611943 Tpr1g4390 1 51297811 51298792 PCT