Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0676 ATGGCTGATAGGTACTCCCAGTTGAACGGTGCCTTCTATGGCCCCGCCATACCACCGACGACGGAGCAAAGCCGCTCTAGCTACCACCGTGATAGAAGCTGTTGTGGTTGTCTCTTTAGCATCTTATGGAAGATTGTTGTCGCACTCGCGATTCTCTTTGGTCTTATAATAGTTATCTTTTATCTCATTGTTCAACCCCGCGCCTTTAAGTTCTATGTCACGAAAGCTCAACTAACCCAATTTGATTACACCAACAACACACTACACTACAACATGGTGCTCAATTTCACAGCCCGCAACCCAAACAAAAAACTCGGTATATATTATGATGATGTGGAGGCTCGAGCATTTTATGAAGGGTCGAGGTTTGCTATTGTTGATGTGATCACATTCAAGAACTCGTTCCGCCAAGACAAGAAGAGAAGTGATCCTATGAGTGGCGTTTTCTCAGGACAACAATTGTTGATGCTCGACAATGATCAAGTATCAAAGTTCAACAAAGACCAAATTATTGGAATTTATGATATTCGTGTGAAGCTCTACTTCAGGATTAGATTCAAACTTGGAGACTCAATATCTAGCAATTACAAGCCCAAGGTTAAATGCGATCTCAATATTCCCTTGAATTCTAGTAATGCCCCGACTATCTTCAACCGAGTTGTGCCCAACAAGTGCCGCGTTGAATTCTAG 690 0.4261 MADRYSQLNGAFYGPAIPPTTEQSRSSYHRDRSCCGCLFSILWKIVVALAILFGLIIVIFYLIVQPRAFKFYVTKAQLTQFDYTNNTLHYNMVLNFTARNPNKKLGIYYDDVEARAFYEGSRFAIVDVITFKNSFRQDKKRSDPMSGVFSGQQLLMLDNDQVSKFNKDQIIGIYDIRVKLYFRIRFKLGDSISSNYKPKVKCDLNIPLNSSNAPTIFNRVVPNKCRVEF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0676 229 Pfam Late embryogenesis abundant protein 96 192 IPR004864 -
Tpr6g0676 229 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 226 - -
Tpr6g0676 229 PANTHER OS05G0367900 PROTEIN 21 226 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0676 Tpr-Chr6 5600210 5601258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0676 63 213 SNARE and Associated Proteins AT1G32270 35.443 1.46e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0676 - - gmx:100795302 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0676 6 5600210 5601258 Tpr6g0676 6 5600210 5601258 ECH