Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0668 ATGAACAACCACCACACAACACTCCTGTTCTTCCTCTTCCTCCTCTCACCATCTCTAATCCTCACAACAACCCACCCAAACGACCTTAAAATCCTCAACGACTTCAAAAACAACCTAGACAACCCCGAACTCCTACAATGGCCTAAAAACAACAACGACCCATGTGGTCCCCCTTCTTGGAAATTCATCTTCTGCGACGGTGACAGAGTCTCACAAATTCAAACTAAAAACTTGAACCTTTCTGGTACCTTACCACAAAATCTAAACCAACTTCCACAACTCTTCAACTTGGGTCTTCAAAACAACAAACTCCACGGTCCATTACCGTCGCTAAAAGGGTTATCAAATCTCAAATATGCTTATCTTGATAACAATGAATTTGACACTATCCCTTTTGATTTCTTTGAAGGTTTATCTAGTTTAGAGATTCTTGCATTGGATAACAACAATCTCAATGTTACTTCAAATGGGTGGCAATTTCCTTCTTCTTTAATGGATTCACCTCAGTTGAAAACTTTATCTTGTATGACTTGTAATTTGGCTGGTGTTTTACCGGATTTTCTTGGAAAAATGAACTCTCTTTCGTATTTGAAACTTTCCGGTAACAGTTTATCCGGTGAGATTCCGGTGAGTCTTAATGGTTCTGGTTTGCAGACTTTATGGTTGAATAATCAAAAGGGTGAGTTACTTTCTGGGAATATTGATGTTGTTGCTACTATGGTTTCTCTTACTAGTTTATGGCTTCATGGAAACAGGTTCACCGGTTCGATTCCGGAGAATATTGGTGACTTGGTTTCTCTAAAAGATCTTAATCTTAATGGTAATGAACTTGTTGGACTTGTTCCTAAGTCTTTAGGTGATTTGGAATTGGATAATCTTGATTTGAATAATAATCGGTTTATGGGTCCGATTCCGAATTTTAAAGCTTCTAAAGTTTCTTATAGTAATAATGATTTTTGTTTGAATCAAACTGGTGTTAGTTGTTCTTTTGAAGTTATGGCTCTTTTGGGTTTTCTTGGTGGGTTGAATTATCCTTCAAATTTAGTTGATTCATGGATTGGGAATAACCCTTGTGAGAGTTGGTTGGGGATAAAATGTAATACTGATGGTAAAGTTTCTATGATTAATATGCAGCATTTTAAACTTAATGGTACTTTAAGTCCTTCTGTTGCAAATTTAGGTTCTTTAGCTGAAATCAGATTGGGGGGTAATAATCTCAATGGTGTAGTGCCTAGTAATTGGACTGGATTGATGAAGTTGAATTTGTTGGATCTGACTGACAATAATATTTCGCCTCCTATGCCGGTTTTCAGTAATGGATTGAAACCTATGGTTGACGGGAATTCTCTGTTGAATGGTGGCGGCTCAGACAGTCCTTCGTCGGGGAAAAATGGTACATCGGGTGGATCTGGGAATATTGGTGGAGATACACATGGACACTCGAATTCAAGTTCAAGTGATTCGGTTGAAACGAAACAGTCCAAAAGGAAAGGGCTGGTTTTGATTGTAGCTCCCATTGCTGGTGTAGCGGCTGCTGCTTTTCTGTTGATACCGCTTTACGTGTATTGTTTCAGAAGGACAAAGGATGGCTTCCAGGCTCCAAGTTCACTTGTAGTTCACCCTAGAGATCCATCTGATTCGGACAGTACTGTAAAGATAGCTATTGCTAATGGAAGTGTTTCCACTTTGACAGGGAGTGGAAATGGTAGTAGAAACAGCAGTGCAATTGGCGATTCTCATGTCATTGAAGCTGGAAATCTTGTCATATCCGTTCAAGTTCTAAGAAACGTGACAAAGAATTTCGCCCCTGAGAACGAGCTCGGCCGCGGTGGATTCGGAGTTGTTTATAAGGGAGAGTTGGATGATGGGACTAAGATTGCGGTTAAAAGAATGGAAGCTGGTGTGATCACCAATAAAGCCTTGGATGAATTTCAGGCGGAAATTGCAGTTTTGTCGAAAGTTCGACATCGACATCTAGTGGCCCTTATTGGTTATTCCATTGAAGGTAATGAGAGGATTCTAGTGTACGAGTATATGCCACAAGGTGCTCTCAGTCAGCATCTTTTCCATTGGAAGAGCTTTGGACTTGAGCCTCTCTCTTGGAAGAGGAGGCTTAATATTGCATTGGATGTTGCTAGAGGAATGGAGTATCTTCATACTCTTGCTCACCAGAGCTTCATTCATAGAGATCTTAAGTCCTCAAATATTTTGCTTGCCGATGATTTTAGAGCTAAAGTCTCAGATTTTGGATTGGTAAAACTTGCTCCTAATGGCGAAAAATCTGTAGTGACCAAACTTGCTGGAACCTTTGGATACTTGGCTCCAGAATATGCAGTGACTGGAAAAATCACTACCAAAGTAGATGTTTTCAGTTTTGGGGTTGTGCTAATGGAGCTGTTGTCTGGATTGATGGCACTTGATGAGAGTAGACCTGAGGAAAGCCAATACTTGGCGGCATGGTTCTGGGATATAAAATCAGATAAGAAGAGACTAATGGCTGCTATTGACCCAACCCTCGACATAAACGAAGAAACATTCGAGAGCGTCTCAATTATTGCCGAGCTAGCCGGACATTGCACGGCTAGAGAACCAAACCAAAGGCCAGAAATGGGTCATGCTGTCAATGTTCTTGCACCACTTGTTGAAAAATGGAAACCGTTCGACGATGACCCCGACGAGTATTCCGGCATCGATTATAGTCTTCCCCTCAATCAAATGGTGAAAGGATGGCAAGAGGCTGAAGGAAAGGACACAAGTTATATGGACCTAGAAGACAGCAAGAGTAGTATCCCCGCAAGACCTACTGGATTTGCAGATTCTTTTACTTCGGCTGATGGCCGGTGA 2844 0.41 MNNHHTTLLFFLFLLSPSLILTTTHPNDLKILNDFKNNLDNPELLQWPKNNNDPCGPPSWKFIFCDGDRVSQIQTKNLNLSGTLPQNLNQLPQLFNLGLQNNKLHGPLPSLKGLSNLKYAYLDNNEFDTIPFDFFEGLSSLEILALDNNNLNVTSNGWQFPSSLMDSPQLKTLSCMTCNLAGVLPDFLGKMNSLSYLKLSGNSLSGEIPVSLNGSGLQTLWLNNQKGELLSGNIDVVATMVSLTSLWLHGNRFTGSIPENIGDLVSLKDLNLNGNELVGLVPKSLGDLELDNLDLNNNRFMGPIPNFKASKVSYSNNDFCLNQTGVSCSFEVMALLGFLGGLNYPSNLVDSWIGNNPCESWLGIKCNTDGKVSMINMQHFKLNGTLSPSVANLGSLAEIRLGGNNLNGVVPSNWTGLMKLNLLDLTDNNISPPMPVFSNGLKPMVDGNSLLNGGGSDSPSSGKNGTSGGSGNIGGDTHGHSNSSSSDSVETKQSKRKGLVLIVAPIAGVAAAAFLLIPLYVYCFRRTKDGFQAPSSLVVHPRDPSDSDSTVKIAIANGSVSTLTGSGNGSRNSSAIGDSHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVITNKALDEFQAEIAVLSKVRHRHLVALIGYSIEGNERILVYEYMPQGALSQHLFHWKSFGLEPLSWKRRLNIALDVARGMEYLHTLAHQSFIHRDLKSSNILLADDFRAKVSDFGLVKLAPNGEKSVVTKLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLSGLMALDESRPEESQYLAAWFWDIKSDKKRLMAAIDPTLDINEETFESVSIIAELAGHCTAREPNQRPEMGHAVNVLAPLVEKWKPFDDDPDEYSGIDYSLPLNQMVKGWQEAEGKDTSYMDLEDSKSSIPARPTGFADSFTSADGR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0668 947 ProSiteProfiles Protein kinase domain profile. 601 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0668 947 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Tpr6g0668 947 Pfam Leucine rich repeat N-terminal domain 333 367 IPR013210 -
Tpr6g0668 947 Gene3D Ribonuclease Inhibitor 330 452 IPR032675 -
Tpr6g0668 947 ProSitePatterns Protein kinases ATP-binding region signature. 607 629 IPR017441 GO:0005524
Tpr6g0668 947 SUPERFAMILY L domain-like 331 437 - -
Tpr6g0668 947 SMART LRR_typ_2 114 137 IPR003591 -
Tpr6g0668 947 SMART LRR_typ_2 393 416 IPR003591 -
Tpr6g0668 947 SMART LRR_typ_2 240 263 IPR003591 -
Tpr6g0668 947 SMART LRR_typ_2 191 215 IPR003591 -
Tpr6g0668 947 SMART LRR_typ_2 138 160 IPR003591 -
Tpr6g0668 947 SMART LRR_typ_2 264 287 IPR003591 -
Tpr6g0668 947 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 1 947 - -
Tpr6g0668 947 Gene3D Transferase(Phosphotransferase) domain 1 679 893 - -
Tpr6g0668 947 MobiDBLite consensus disorder prediction 917 947 - -
Tpr6g0668 947 MobiDBLite consensus disorder prediction 448 491 - -
Tpr6g0668 947 Pfam Leucine rich repeat 242 300 IPR001611 GO:0005515
Tpr6g0668 947 MobiDBLite consensus disorder prediction 451 489 - -
Tpr6g0668 947 SUPERFAMILY Protein kinase-like (PK-like) 579 877 IPR011009 -
Tpr6g0668 947 SUPERFAMILY L domain-like 24 308 - -
Tpr6g0668 947 PANTHER OSJNBA0070M12.3 PROTEIN 1 947 - -
Tpr6g0668 947 CDD STKc_IRAK 607 880 - -
Tpr6g0668 947 SMART serkin_6 601 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0668 947 Gene3D Phosphorylase Kinase; domain 1 565 678 - -
Tpr6g0668 947 Gene3D Ribonuclease Inhibitor 26 327 IPR032675 -
Tpr6g0668 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Tpr6g0668 947 Pfam Protein tyrosine and serine/threonine kinase 604 875 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0668 Tpr-Chr6 5506692 5511249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0668 80 914 Receptor kinase-like Gene Family AT1G55610 29.899 1.45e-82 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tpr6g0668 Pkinase 7.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0668 - - gmx:100305366 1389.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0668 6 5506692 5511249 Tpr6g0668 6 5506692 5511249 ECH