Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0665 ATGGCAGCATACTTTCATGGTAATTCTGAAATCCAATCAAGTGGTGGCGGCGGCGGTGGCGCCGACGGACTTCAAACACTTGTTCTAATGAATCCAAGCTATATGCAATATTCAGACAACTCACAACAACAGCAAGCTCAACAGCCTACTCATGCCTCCGCCGCTGCCGGTAACTTTGTTTTTCTCAACTCAACAACTACAGAAAACAACTCCTTCTCACCTCACGCGCCACCATCCAACACACAACAATTCGTTGGCATCCCTCTCGGAAACCAACACCAAATCCACGCGCACCACCATGACGTTGTACCTTCCTTGCATGGCTTCCTTCCTCACATGCAGTACAATCAGTGGAACACAATTGACCCAAATACAGCGGCGCGTGAAACACCACGCGCTCAACAAGGACTGAATTTAACCCTCTCTTCACAGCCAGCACGGTTTATGTCATTTCGAGAGGGTGCTGCTATGTCTGGTGGGTCGCCATCAACGCCGGCTTCTGGTGTTACTACTAATAACAATGGGAATTCAGGGATTCAGGTTTTGAGTTCGAAGTATTTGAGGGCGGCGCACGAGCTTTTAGAAGAGGTTGTGAATGTTAATGTTGGTGTTGAATTGGGAAAGAAGAGTGGTGGATTGAATAAGGTGATCGGAGAGTCGTCGGGAGTTGGAAGTGGAGGAGATGGATCAACTGTTGGTGGTGGGGAGGGAAGTGGGAAGCGTAGCACTGAGCTATCAACGGCGGAGAGACAAGAAATACAGATGAAGAAAGCTAAGCTAATTACCATGCTTGATGAGGTGGAACAAAGGTACAGACAATATCACCATCAAATGGAGGTTGTGGTCTCCTCATTCGAACAAGCTGCCGGCCTTGGTTCTGCGAGGACATACACTGCTCTTGCCCTGCAAACAATCTCGAAACAATTTCGGTGTTTGAAAGATGCCATAACAGGACAAATTAAAGCTACAAATAAGAGCTTAGGAGAAGAAGATTGCTTTGGTGGTAAAATTGAAGGTTCAAGGCTTAAATATGTTGATCATCAACTACGTCAACAACGCGCTCTACAACAGTTGGGAATGATCCAGCACAATGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAACACTTCCTCCACCCTTATCCCAAGGATTCAGACAAGCACATGCTTGCAAAACAAACAGGGCTTACTAGGAGTCAGGTTTCAAATTGGTTTATAAATGCTCGAGTTAGGCTTTGGAAGCCAATGGTTGAAGAAATGTACTTAGAGGAAATGAAGGAGAATGAACTAAATGGATCAGAAGATAAATCAAGCAAGAGCAATGAAGATTCATCTATGAAAGTGCCATCCCCTCAAGAGAAAGGTCTTGAAACAGAACCTAAAGGTTACAATTCCACACAAGACATTTCCCAAAGCCAAGACACATCAATAATTTCTGTTTCTAGACCACAAACATCACCACATGTTGGAAATGTTAGAAACCAATCAGGAGGATTCAGCTTCATTGGATCATCAGAACTAGAAGGTATACCACAAACAAGTCCTAAAAAACCAAGGAACCATGAACTTATCCATAATCCTAATAGTTTCATTGATGTTAAGCACAATGAGGCAAATAATGAGATAAAATTTGGTGATGAGAGACAGAATAGAGATGGATACTCTTTTATGGGAAACCAAACAAATTTCATGGGTGGATTTGGACAATACCCAATTGGTGATATTGGTAGGTTTGATTCAGAACAATTTACACCAAGGTTTTCAAGTAATGGTGTTTCACTCACTCTTGGTCTTGACTCAATACAAGGAAATCATCAACATCAAACATTTCTACCAAACCAAAACATTCAACTAGGAAGAAGCATTGACATAAGTGAACCAAATGAGTTTGGTTCCATAAACACTTCCTCTCCTCAATATGAAAGTATCAACATGCAAAACCCAAAAAGGTTTGCTGCACAATTGTTATCAGATTTTGTGGCATAA 2019 0.4264 MAAYFHGNSEIQSSGGGGGGADGLQTLVLMNPSYMQYSDNSQQQQAQQPTHASAAAGNFVFLNSTTTENNSFSPHAPPSNTQQFVGIPLGNQHQIHAHHHDVVPSLHGFLPHMQYNQWNTIDPNTAARETPRAQQGLNLTLSSQPARFMSFREGAAMSGGSPSTPASGVTTNNNGNSGIQVLSSKYLRAAHELLEEVVNVNVGVELGKKSGGLNKVIGESSGVGSGGDGSTVGGGEGSGKRSTELSTAERQEIQMKKAKLITMLDEVEQRYRQYHHQMEVVVSSFEQAAGLGSARTYTALALQTISKQFRCLKDAITGQIKATNKSLGEEDCFGGKIEGSRLKYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKENELNGSEDKSSKSNEDSSMKVPSPQEKGLETEPKGYNSTQDISQSQDTSIISVSRPQTSPHVGNVRNQSGGFSFIGSSELEGIPQTSPKKPRNHELIHNPNSFIDVKHNEANNEIKFGDERQNRDGYSFMGNQTNFMGGFGQYPIGDIGRFDSEQFTPRFSSNGVSLTLGLDSIQGNHQHQTFLPNQNIQLGRSIDISEPNEFGSINTSSPQYESINMQNPKRFAAQLLSDFVA* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0665 672 Coils Coil 250 270 - -
Tpr6g0665 672 Gene3D - 369 447 - -
Tpr6g0665 672 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 619 - -
Tpr6g0665 672 SMART HOX_1 366 430 IPR001356 GO:0003677
Tpr6g0665 672 MobiDBLite consensus disorder prediction 437 504 - -
Tpr6g0665 672 MobiDBLite consensus disorder prediction 437 453 - -
Tpr6g0665 672 Pfam Associated with HOX 181 317 IPR006563 -
Tpr6g0665 672 CDD homeodomain 366 427 IPR001356 GO:0003677
Tpr6g0665 672 Pfam Homeobox KN domain 383 422 IPR008422 GO:0003677|GO:0006355
Tpr6g0665 672 MobiDBLite consensus disorder prediction 470 504 - -
Tpr6g0665 672 ProSiteProfiles 'Homeobox' domain profile. 363 426 IPR001356 GO:0003677
Tpr6g0665 672 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 619 - -
Tpr6g0665 672 SMART prehox3 176 318 IPR006563 -
Tpr6g0665 672 MobiDBLite consensus disorder prediction 219 249 - -
Tpr6g0665 672 SUPERFAMILY Homeodomain-like 367 433 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0665 Tpr-Chr6 5438315 5445070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0665 1 672 Homeobox Transcription Factor Family AT2G35940 48.123 1.15e-165 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Tpr6g0665 POX 9.4e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0665 - - gmx:100810901 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0665 6 5438315 5445070 Tpr6g0665 6 5438315 5445070 ECH
Tpr6g0665 6 5438315 5445070 Tpr1g4397 1 51498719 51504045 PCT