Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0650 ATGGGAAACAACTGTGTTGGATCTAGAAAACCCTCTAAAGATGATCAAATTTTTCCATCTATTTTTCCGGCTTCTTTTTGGTGGTCATCATGGTCACACCCACCACCTGTTCACAATATTGACAACAAAGACATCAAGCAAATTAGTATATCACATGATTTAGAATCAGTTATTATGCAGTTCAAGGACCAAGCTAAACCTGCTACAAAACCAAAAGCAAGAGCGAAACCGATGATGTTGCCTAATATTAAGAGGGTAGCAGCAAAAACAAAAAGTGCCGGACTTCAAGCGGAATCGGTTTTGCTGACGAATTTAGGTCCTTTTAGGCAATACTATAAGTTGGGAGATGAACTTGGGAAAGGACAATATGGAATTACTTCACTTTGTTTTGAGAAAGCAACGGGGAAAAAGTATGCGTGCAAGACAATCCCGAAGGTAAAATTGGTGAGAGATGATGATATAGAGGATGTGAGGAGGGAGATTAAGATAATGCATCATTTGGTTGGGAGTCCTAATGTGATAAATATTAAAGGAGCTTATGAGGATTCTATTGTTGTTTATATTGTCATGGAATTATGTGAAGGGGGTGAGTTGTTTGATAGGATTGTGGAAAGGGGTCATTACACTGAAAGAAAAGCAGCTAAACTTGCTAGGACTATTGTTAGTGTTGTTGAAGCATGTCACTCACTTGGTGTAATGCATCGCGATCTTAAGCCTGAGAATTTTCTTTTTGTTGATGGACATGAAGACTCTACTCTTAAGGCAATTGATTTTGGAATGTCTGTTTTCTTCAAACCAGGAGAAAAGTTTAGTGATGTGGTAGGAAGTGGTTATTACATTGCACCTGAGGTTCTAGACAAGTGTTATGGTCAAGAAGCTGATGTTTGGAGTGCAGGTGTGATCATATACATTCTCTTATGTGGAACACCTCCCTTTTATGGTGAATCGGAACAAGAGATATTTCACGAGATTTTGCATGGTGAACTTGACTTCTCTTCGGATCCTTGGCCAAGTATCTCTGAAAGTGCAAAAGACTTGGTTAAGAAGATGCTTGTTAGAGATCCTAGTAAAAGGATAACAGCGCATGAAGTTCTTTGTCACCCTTGGATTCAGGTTGATGGAGTTGCTCCAGACAAGCCTCTTGATTCTGCAGTTTTGAGTCGTTTAAAGCAATTTTCGGCTATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCGGAGAGTCTCTCTGAAGAAGAAATTTATGGATTGAAAGAATTGTTTAAGATGATAGACACAGACAACAGTGGCCAAATTACTTTCGAAAAACTCAAGGCTGGACTGAAAATGTTCGGTGCCAATCTCGGTGAATCCGAAATATTTGATCTATTGCAAGCTGCAGATATTGATAATAGTGGCACAATTGACTATGGAGAATTCATAGCTGCCACATTGCATTTAAACAAAGTTGGCAAGGAAGATAATTTAGCTGCAGCTTTCTCTTATTTTGATAAAGATGGAAGTGGCTACATCACTCAAAATGAGCTTCAACAAGTTTGTAAAGAATTTGGTATGGAAGATGCCCACTTAGAGGAAATGATCAGAGAAGTTGATCAAAATAATGATGGACAAATAGACTACAATGAATTTGTAGCTATGATGCAAAGAGGCAATGCAGATTTAGGTAATAGTGGTTTAAAGTGTAGCACTAGTTTTAACATTGGATTAAGGAAGACAGAGGCACTATCAGTATATTAA 1740 0.3816 MGNNCVGSRKPSKDDQIFPSIFPASFWWSSWSHPPPVHNIDNKDIKQISISHDLESVIMQFKDQAKPATKPKARAKPMMLPNIKRVAAKTKSAGLQAESVLLTNLGPFRQYYKLGDELGKGQYGITSLCFEKATGKKYACKTIPKVKLVRDDDIEDVRREIKIMHHLVGSPNVINIKGAYEDSIVVYIVMELCEGGELFDRIVERGHYTERKAAKLARTIVSVVEACHSLGVMHRDLKPENFLFVDGHEDSTLKAIDFGMSVFFKPGEKFSDVVGSGYYIAPEVLDKCYGQEADVWSAGVIIYILLCGTPPFYGESEQEIFHEILHGELDFSSDPWPSISESAKDLVKKMLVRDPSKRITAHEVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIYGLKELFKMIDTDNSGQITFEKLKAGLKMFGANLGESEIFDLLQAADIDNSGTIDYGEFIAATLHLNKVGKEDNLAAAFSYFDKDGSGYITQNELQQVCKEFGMEDAHLEEMIREVDQNNDGQIDYNEFVAMMQRGNADLGNSGLKCSTSFNIGLRKTEALSVY* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0650 579 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 556 - -
Tpr6g0650 579 SUPERFAMILY EF-hand 410 550 IPR011992 -
Tpr6g0650 579 SMART efh_1 523 551 IPR002048 GO:0005509
Tpr6g0650 579 SMART efh_1 453 481 IPR002048 GO:0005509
Tpr6g0650 579 SMART efh_1 489 517 IPR002048 GO:0005509
Tpr6g0650 579 SMART efh_1 417 445 IPR002048 GO:0005509
Tpr6g0650 579 Gene3D Transferase(Phosphotransferase) domain 1 198 375 - -
Tpr6g0650 579 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 37 556 - -
Tpr6g0650 579 Pfam Protein kinase domain 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0650 579 Gene3D - 377 553 - -
Tpr6g0650 579 Gene3D Phosphorylase Kinase; domain 1 114 197 - -
Tpr6g0650 579 Pfam EF-hand domain pair 489 549 IPR002048 GO:0005509
Tpr6g0650 579 ProSiteProfiles EF-hand calcium-binding domain profile. 418 448 IPR002048 GO:0005509
Tpr6g0650 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Tpr6g0650 579 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Tpr6g0650 579 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Tpr6g0650 579 ProSiteProfiles EF-hand calcium-binding domain profile. 519 554 IPR002048 GO:0005509
Tpr6g0650 579 ProSitePatterns EF-hand calcium-binding domain. 532 544 IPR018247 -
Tpr6g0650 579 SUPERFAMILY Protein kinase-like (PK-like) 111 371 IPR011009 -
Tpr6g0650 579 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Tpr6g0650 579 Pfam EF-hand domain pair 430 480 IPR002048 GO:0005509
Tpr6g0650 579 ProSiteProfiles EF-hand calcium-binding domain profile. 485 518 IPR002048 GO:0005509
Tpr6g0650 579 ProSiteProfiles Protein kinase domain profile. 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0650 579 CDD STKc_CAMK 112 369 - -
Tpr6g0650 579 SMART serkin_6 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0650 579 CDD EFh 490 549 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0650 Tpr-Chr6 5277186 5281722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0650 62 571 EF-hand Containing Proteins AT3G10660 70.588 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr6g0650 Pkinase 4.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0650 K13412 - gmx:100814475 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0650 6 5277186 5281722 Tpr1g4453 1 52310859 52326067 PCT
Tpr1g4439 1 52104471 52109212 Tpr6g0650 6 5277186 5281722 PCT