Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0644 ATGGCCAAAGAGAGTTTTAGAGTTAGAGTTTGTTGCTTTTTTAATTGCAATTTACTACTATTTGTTTTCTACTTGTTCTTTATTTTTTTTTTTATTTGGCTTAGAAAGATCAATGATTATGGATGGGACACTGCTGGATTATCTGCTGACCCAGAGGCATTTGCCAAGAACAGGGCTCTTGAGGTGATTCATGGAAGATGGGCTATGCTAGGAGCACTAGGATGCATCACACCAGAAGTACTTGAAAAATGGGTGAGAGTTGACTTCAAAGAACCAGTTTGGTTCAAAGCAGGATCACAAATATTCTCAGAAGGTGGACTTGACTACTTAGGAAACCCAAACCTTGTTCATGCACAAAGCATCTTAGCATGTTTGTTGATTGAATGCAAGATGAAGATGAATCCCTGGGCATGTTGCTTCTTGAATTTGTGGCTTTGTAATATCTATTAG 450 0.3822 MAKESFRVRVCCFFNCNLLLFVFYLFFIFFFIWLRKINDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILACLLIECKMKMNPWACCFLNLWLCNIY* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0644 149 SUPERFAMILY Chlorophyll a-b binding protein 37 127 - -
Tpr6g0644 149 Gene3D Chlorophyll a/b binding protein domain 35 138 - -
Tpr6g0644 149 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 38 126 - -
Tpr6g0644 149 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 38 126 IPR001344 GO:0009765|GO:0016020
Tpr6g0644 149 Pfam Chlorophyll A-B binding protein 37 131 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0644 Tpr-Chr6 5247343 5249626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0644 38 129 Chloroplast and Mitochondria Gene Families AT2G05070 77.174 6.08e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0644 K08914 - thj:104799908 181.8