Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0640 ATGATTGATATATATATATATATACTCTCTAGATCTATTCCATTTTCATACCATAATAATCCCGCGGTTTTCTTCTCAAGCTTTCTATTTCTGCTTTGGTTCTCACGCCAGTGTGGCGGCATGGAGGATGGAAATTATACAAGTGGATTATGGAGAACGAAATCGGAACAACTAGAGTCGGTGATAGAAGATTTGAAGTCACCACCAGGATCAAGTGAATCGAATGGAGTGGTGGACGGTGGTAGTGGGAGTCTTACAAGGAAGTCGGGCAAGAGGACGTCGCCCGGTGGAAGAAACGCGCACATAAGGAAAGCGAGGAGCGCCCAAACATCGTTGAAGGTTGATTTGGATGAGGTAAATAGTGGTGCTGCCCTTAGTAGAGCTTCAAGTTTGGGACTCTCATTCTCCTTTACTGGCTTCTCTGTTCCTCTTGATGAAATCTCTAACTCCAAACCATTCAGTGATGATGATATCCCTGAGGATATTGAAGCTGGAATTCATAAGCCAAAGTTTCAAACAGAACCTACTCTACCAATATATCTAAAGTTCACAGATGTGACATACAAGGTAGTGATTAAAGGCATGACAAAAAGTAATGAAAAAGATATCTTGAAAGGGATTACTGGTTGTGTAAATCCAGGTGAAGTTTTAGCATTGATGGGTCCTTCAGGAAGTGGAAAAACATCTTTGTTAAATCTACTTGGACAAAGATTACATCAACCAACAATTGGTGGATCTATTACTTATAATGATCAACCATATTCCAAGTTCCTAAAAAGCAGGATTGGATTTGTGACACAAGATGATGTTTTGTTTCCTCACCTAACTGTGAAAGAGACATTAACATACGCGGCTCGTTTAAGGTTGCCAAAAACATTAACCAAAGAGGAAAAGGAAAAAAGAGCTTTAGATGTTATCTATGAGTTAGGCTTAGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTTTGTTCGTGGAGTATCCGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAATCCTTCTCTTTTGTTTCTTGATGAACCGACATCTGGTTTGGATTCTACAACTGCATTGAGGATAGTTCAAATGTTACATGACATAGCCGAGGCTGGTAAAACTATAGTGACAACAATTCATCAACCATCAAGTAGACTCTTTCACAAATTTGACAAGTTGATTCTTTTGGGAAAAGGGAACTTACTTTACTTTGGAAAAGCATCAGAAGCAATGGACTATTTCAAGTTTATAGGGTGTAGTCCTCTCATTACCATGAACCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACATGCTTGATATTTCTGTACCATCAGAGTTAGAGGATAAAGTTCATATGGGAAATGTAGAAACTGAAGCTTCCAATGGGAAACCCTCAGCTGCAGCTGTACAAGAGTATCTGGCGGAGGCATATGAGACTAAAGTAGCAGAAGCAGAGAAGAAAAAGCTAATGGTTCCAATTCCTCTTGATGAAGAAATTAAAGCTAAGGTTTGTTCGCGTAAAAGACAATGGGGAGCAAGTTGGTTAGAACAATACTCAATATTGTTTTCTAGAGGATTCAAAGAACGTAGGCATGACTATTTTAGCTGGTTGAGAGTCACACAAGTTCTTTCCACTGCAGTCATTTTGGGATTACTATGGTGGCAATCTGATGCTAATAACCCAAAGGGTCTTCAAGATCAGGCAGGATTGCTTTTCTTTATCGCGGTGTTTTGGGGATTTTTTCCTGTGTTCACAGCAATATTCACATTCCCACAAGAGAGAGCAATGTTGAATAAGGAAAGAGCAACAGATATGTACAGATTAAGTGCATACTTTGTGGCTAGAACCACAAGTGATCTTCCATTAGATTTGGTGTTACCAGTGCTTTTCCTTCTCGTTGTTTATTTCATGGCTGGTTTGAGACTCAGTGCAGGACCTTTTTTCCTTAGTATTCTTACAGTTTTTCTCTGCATTGTAGCAGCTCAGGGACTTGGACTTGCTATTGGTGCTACATTGATGGACTTGAAAAGGGCAACAACTTTGGCATCAGTCACTGTCATGACTTTCATGTTGGCTGGGGGTTTCTTTGTACAGAAAGTCCCCATATTCATATCATGGATTCGGTACCTATCTTTCAACTACCACACATACAAACTGTTGCTAAAGGTGCAATATGAACACATAACACCTAGCATAAATGGGATGAGAATTGACAGTGGTATCAATGAGGTTGTTGCTCTAATAGCTATGGTTTTTGGTTACCGTTTATTGGCATATTTTTCTCTACGGTGGATGAATATTCAACCATAG 2328 0.3969 MIDIYIYILSRSIPFSYHNNPAVFFSSFLFLLWFSRQCGGMEDGNYTSGLWRTKSEQLESVIEDLKSPPGSSESNGVVDGGSGSLTRKSGKRTSPGGRNAHIRKARSAQTSLKVDLDEVNSGAALSRASSLGLSFSFTGFSVPLDEISNSKPFSDDDIPEDIEAGIHKPKFQTEPTLPIYLKFTDVTYKVVIKGMTKSNEKDILKGITGCVNPGEVLALMGPSGSGKTSLLNLLGQRLHQPTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTKEEKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEAGKTIVTTIHQPSSRLFHKFDKLILLGKGNLLYFGKASEAMDYFKFIGCSPLITMNPAEFLLDLANGNMLDISVPSELEDKVHMGNVETEASNGKPSAAAVQEYLAEAYETKVAEAEKKKLMVPIPLDEEIKAKVCSRKRQWGASWLEQYSILFSRGFKERRHDYFSWLRVTQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERATDMYRLSAYFVARTTSDLPLDLVLPVLFLLVVYFMAGLRLSAGPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYLSFNYHTYKLLLKVQYEHITPSINGMRIDSGINEVVALIAMVFGYRLLAYFSLRWMNIQP* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0640 775 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 181 427 IPR003439 GO:0005524
Tpr6g0640 775 SMART AAA_5 213 404 IPR003593 -
Tpr6g0640 775 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 64 771 - -
Tpr6g0640 775 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 64 771 - -
Tpr6g0640 775 MobiDBLite consensus disorder prediction 65 106 - -
Tpr6g0640 775 Pfam ABC-2 type transporter 522 731 IPR013525 GO:0016020|GO:0140359
Tpr6g0640 775 MobiDBLite consensus disorder prediction 67 93 - -
Tpr6g0640 775 Pfam ABC transporter 204 355 IPR003439 GO:0005524
Tpr6g0640 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 420 IPR027417 -
Tpr6g0640 775 ProSitePatterns ABC transporters family signature. 327 341 IPR017871 GO:0005524
Tpr6g0640 775 CDD ABCG_EPDR 178 409 - -
Tpr6g0640 775 Gene3D - 180 421 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0640 Tpr-Chr6 5220562 5227582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0640 203 441 Calmodulin-binding Proteins AT2G36910 28.163 1.08e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0640 K05681 - gmx:100798801 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0640 6 5220562 5227582 Tpr6g0640 6 5220562 5227582 ECH
Tpr6g0640 6 5220562 5227582 Tpr1g4449 1 52234328 52245976 PCT