Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0599 ATGCAATTTATACTTATTTTCCACTATAAATATACAAAACTAGGGTTTCCTACCGTGAACCTTGCGGCCGCACTCTCTCCGCGACTCTCAATCATGGCTGAAACCGTCCCTGCTGTCGTCGCCGCCGAAGTTGATCCCAATCTTATCGAGGTCAAGCTCTTCAACAAATGGAGCTTCGAGGATGTTCAGGTTAGTGATACTTCTCTTGAGGACTACATTGGAGTGTTGGCGTCGAAGCACGCAACATATGTTCCTCACACTGCTGGGAGGTACTCGAAGAAGAGATTCAGAAAGGCTCAGTGTCCCATCATTGAGAGGCTGACAAACTCTCTCATGATGCACGGGAGAAACAATGGAAAGAAACTCATGGCTGTTAAGATTATTAAGCATGCTATGGAGATCATTCACTTGCTAACTGACCAGAACCCAATTCAAGTTATTGTTGATGCTGTTGTCAACAGTGGTCCCAGAGAAGATGCAACTAGAATTGGATCTGCTGGAGTTGTTAGGAGGCAAGCTGTGGATATCTCACCCCTCCGCAGGGTTAACCAGGCCATCTATCTTCTAACAACCGGTGCCCGTGAAGCTGCATTCAGGAACATCAAGACAGTTGCCGAATGCTTAGCTGATGAACTTATTAATGCTGCTAAAGGTTCTTCCAACAGCTATGCAATCAAGAAAAAGGATGAGATAGAGAGAGTTGCCAAGGCAAATCGTTAA 720 0.4542 MQFILIFHYKYTKLGFPTVNLAAALSPRLSIMAETVPAVVAAEVDPNLIEVKLFNKWSFEDVQVSDTSLEDYIGVLASKHATYVPHTAGRYSKKRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVKIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0599 239 ProSitePatterns Ribosomal protein S7 signature. 105 131 IPR020606 GO:0003723|GO:0003735|GO:0006412
Tpr6g0599 239 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 17 239 IPR000235 GO:0006412
Tpr6g0599 239 CDD uS7_Eukaryote 52 239 IPR005716 GO:0003735|GO:0006412|GO:0015935
Tpr6g0599 239 PANTHER RIBOSOMAL PROTEIN S7 36 239 IPR000235 GO:0006412
Tpr6g0599 239 SUPERFAMILY Ribosomal protein S7 52 239 IPR036823 -
Tpr6g0599 239 Gene3D Ribosomal protein S7 domain 33 239 IPR036823 -
Tpr6g0599 239 PANTHER 40S RIBOSOMAL PROTEIN S5 36 239 - -
Tpr6g0599 239 Pfam Ribosomal protein S7p/S5e 97 239 IPR023798 -
Tpr6g0599 239 TIGRFAM uS7_euk_arch: ribosomal protein uS7 50 239 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0599 Tpr-Chr6 4905201 4907369 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0599 38 239 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 86.207 1.91e-130 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0599 K02989 - cit:102622374 356.681