Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0589 ATGAGGTTCTTCCTTGTAGCTTCTATGGTTGTGTTATGTTTCATTGGGATTAGTGAAGGAGGTAGCTTAAGGAAGAATTTCTATAGAACTTCATGTCCTCAAGCTGAGCAGATTGTTAAGAACATAACCCAACAACATGTCTCTTCAAGACCTGAGCTCCCAGCCAAGTTGCTAAGATTGCATTTTCATGATTGTTTTGTTAGGGGGTGTGATGGTTCTGTTTTGTTGGAGTCTACCGCAAGTAACACCGCAGAGAAGGATGCAATTCCTAATTTATCCTTAGCAGGCTTTGATGTGATCAAGAACATAAAAGATGTTGTGGAAGCAAAATGTCCTGGAACTGTTTCATGTGCTGATATACTTGCATTGGCTGCTAGAGATGCTGTTTCTGTTCAATTTAATAATGAACCAAAGTGGGAAGTGCTTACTGGTAGAAGAGATGGTACTGTGTCCAAAAGCAGTGAAGCACTCATCAATATCCCATCACCTTTTCAAAACATCACCCAACTCAAGCAAATATTTGCTAGTAAAAACCTTACTCTTCATGATTTGGTTGTTTTATCAGGAGCACACACTATTGGAGTAGGACATTGCAATTTGTTTAGCAGAAGACTTTTCAATTTCACTGGAAAAGGTGATCAAGATCCATCTTTGAATCCCACTTATGCTAATTTCTTGAAGACCAAATGTCAAGGCCTAAGTGACAGAACCACAACAGTAGAAATGGATCCAAATAGTTCAACAAAATTTGATGGACATTATTATCCTATCCTTCTACAGAATAAAGGTCTCTTCACATCAGATGCTACTCTTCTAACAACTAAGCAATCAAGAAACATTGTTAATGAATTGGTTTCACAAAACAAATTCTTCACTGAATTTGCACAGTCAATGCAGAGGATGGGAGCTATTGAGGTTCTGTCAGGTTCAAATGGGGAAATTAGGAGGACGTGCTCTGTTGTTAATTAA 969 0.3829 MRFFLVASMVVLCFIGISEGGSLRKNFYRTSCPQAEQIVKNITQQHVSSRPELPAKLLRLHFHDCFVRGCDGSVLLESTASNTAEKDAIPNLSLAGFDVIKNIKDVVEAKCPGTVSCADILALAARDAVSVQFNNEPKWEVLTGRRDGTVSKSSEALINIPSPFQNITQLKQIFASKNLTLHDLVVLSGAHTIGVGHCNLFSRRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDRTTTVEMDPNSSTKFDGHYYPILLQNKGLFTSDATLLTTKQSRNIVNELVSQNKFFTEFAQSMQRMGAIEVLSGSNGEIRRTCSVVN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0589 322 Pfam Peroxidase 41 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PANTHER PEROXIDASE 3 321 - -
Tpr6g0589 322 PANTHER PEROXIDASE 25-RELATED 3 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 Gene3D Peroxidase, domain 2 161 301 - -
Tpr6g0589 322 ProSiteProfiles Plant heme peroxidase family profile. 22 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 Gene3D - 26 322 - -
Tpr6g0589 322 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr6g0589 322 CDD secretory_peroxidase 23 321 IPR033905 GO:0004601|GO:0042744
Tpr6g0589 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0589 Tpr-Chr6 4821562 4824280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0589 23 322 Peroxidase AT1G05260 55.776 4.19e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0589 K00430 - gmx:100775970 522.316