Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0588 ATGAAGATGAAATTCTTCCTTGTAGCTTCAATGGTGCTTTTTTGTATCCTTGGGATTAGTGAAGGAGGAAGCCTAAGGAAGAATTTCTATAAGAAATCATGTCCTAAAGCTGAGCAGATTGTTAAGAACATAACCATACAACATGTCTCTTCAAGGCCTGAACTTGCAGCCAAGTTGCTAAGAATGCATTTTCATGATTGTTTTGTTAGGGGGTGTGATGGTTCTGTTTTGTTGGAGTCTACTGCAAGTAACACTGCAGAGAAGGATTCATTTCCTAATTTAACATTAGAAGGCTTTGATGTGATCGAGAACATAAAAGAAGCTGTTGAGGAAAAATGCCCTGGAATTGTTTCATGTGCTGATATACTCACATTGGCTGCTAGAGATGCTGTTTCTGTCCAATTTGAGAATAAACCAAAGTGGGAAGTGCTTACTGGTAGAAGAGATGGTACTGTATCCAATAGCAATGAAGTACTCCTCAATCTCCCAGCACCTTTTCATAACCTCACCACGCTTAGACAAATCTTTGCCAGTAAAAAGCTTACTCTTCATGACTTGGTTGTATTATCAGGAGCACACACAATTGGAATAGGACATTGCAACTTATTCAGCAACAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCATCTTTGAATCCCACTTATGCCAATTTCTTGAAGACCAAGTGTCAGAGCCAAAGTGACACCACCACAACAGTAGAAATGGATCCAAATAGCTCAACAAAATTTGACAATGATTATTATCCTATCCTTCTACAGAACAAAGGTCTCTTTATATCAGATGCTACTCTTTTAACAACTAAGCAATCAAGAAACATTGCTAATGAATTGGTTTCACAAAACAAATTCTTCACTGAGTTTGCACAGTCAATGAAGAGGATGGGAGCTATTGAAGTCCTCACAGGTTCAAATGGAGAAATTAGGAGGACATGTTCTGTTGTTAATTAA 975 0.3815 MKMKFFLVASMVLFCILGISEGGSLRKNFYKKSCPKAEQIVKNITIQHVSSRPELAAKLLRMHFHDCFVRGCDGSVLLESTASNTAEKDSFPNLTLEGFDVIENIKEAVEEKCPGIVSCADILTLAARDAVSVQFENKPKWEVLTGRRDGTVSNSNEVLLNLPAPFHNLTTLRQIFASKKLTLHDLVVLSGAHTIGIGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQSQSDTTTTVEMDPNSSTKFDNDYYPILLQNKGLFISDATLLTTKQSRNIANELVSQNKFFTEFAQSMKRMGAIEVLTGSNGEIRRTCSVVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0588 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PANTHER PEROXIDASE 4 323 - -
Tpr6g0588 324 PANTHER PEROXIDASE 25-RELATED 4 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 Pfam Peroxidase 47 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Tpr6g0588 324 Gene3D Peroxidase, domain 2 163 303 - -
Tpr6g0588 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 CDD secretory_peroxidase 25 323 IPR033905 GO:0004601|GO:0042744
Tpr6g0588 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Tpr6g0588 324 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr6g0588 324 Gene3D - 28 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0588 Tpr-Chr6 4815042 4816973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0588 1 324 Peroxidase AT1G05260 53.211 2.50e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0588 K00430 - gmx:100775970 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0588 6 4815042 4816973 Tpr1g1259 1 11282559 11290386 PCT