Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0547 ATGGCTTCAGAAGAAGATGAAGGAAATGTAGTAGCTGTGAACATGGATAACATACAACATGAACAACATGATGATGATAATGATAGTGCTAAAAAGTTTTCGTCACAAATTGTTCGAAAAAGAGATTCTCTTGAACTTGAAGCTGGCGCCACCTCTAATATTACACATAAATCCAAAGGTCCATCAACAACGATAATACTACAACTAGCATTTCAAAGTCTCGGAATAGTTTATGGAGACATTGGAACTTCACCATTGTATGTGTATGCAAGCATCTTCCCTAATGGCATAAATCACAATGATGATATTTTGGGAGCTCTTTCCTTAATCTTCTACACCATCACTCTCATCCCCCTTCTTAAATATGTCTTCTTCGTCTTAAGGGCCACCGATAATGGCGAAGGTGGAACATTTGCTTTGTACTCTCTAATATGTCGTTACTCGAGAGTTGGACTAATTCCAAATCAACAAGCAGAGGATGCAGAGGTGTCAAATTATCAGCTGAAATTGCCAAAGAGAAGGGAGAAGAGAGCATCAATTGTTAAATCTACACTTGAGAACAATCACTTTATGAGGCACTTCCTCTTATTTTCCACTATGCTTGGAACTTCCATGGTCATGGGTGATGGTGTTCTCACCCCTTGCATATCTGTTTTATCGGCTGTTGGAGGGATTAAGCAAGCTGCTAACCAAATAACTGAAGATCAAATTGTATGGATATCAGTAGCAATCTTGATTGGCATTTTTATGGTTCAAAGGTTTGGAACTGATAAAGTGGGTTACACTTTTGCTCCCATTATTTGTATATGGTTTGCATTCATTGCAATTATTGGTCTGTATAATTTCATCAAGTATGATCCATCAGTTATAAAAGCAATAAATCCAAAATACATAGTACATTATTTCATCAGGAATAAGAAAAATGCTTGGGTTTCTCTTGGAGGCGTTGTTCTTTGTATAACAGGAAGTGAAGCACTATTTGCTGATGTTGGACATTTCACAGTTCGACCTATACAATTAAGTATGTGTTTTGTGACTTACCCTACTCTTGTTTTGGCTTATTCTGGACAAGCCGCCTTTCTTCGCAAACACAACGATGTTGTGGCAGACTCATTCTACAAGTCTGTACCAGGTCTTATATATTGGCCAATGTTTGTGATTGCTGTTTTGGCAGCAATTGTAGCTTCTCAAGCTATGATCTCAGGAACTTTCTCTATAATCCAACAATCCCTATCATTGGGATGTTTTCCTCGCGTGCAAGTTGTACATACATCGGCAAAATATGAAGGACAAGTTTATATCCCAGAAGTTAATTACATCCTCATGATTGCTTGTATTGCCATCACTATTGGCTTTAGAACCACAACAGAAATTGGCAATGCCTACGGGATAGCTGTGGTATTTGTGATGTCACTAACATCGTCTCTTCTCGTGCTAATCATGATCATGATATGGAAGACTAACATATTTTTGGTCATTACCTATGTTCTTGTAATTAGTTCATTGGAGCTTGTGTATTTAAGCTCAGTTTTATACAAATTTAACGACGGAGGTTATCTTCCTGTTGCATTTGCCGTGTTTCTAATGTTCATCATGTTTGTTTGGAACAATGTGTACCGAAGGAAGTACTATTACGAACTCAATCACAAGATTACACCAGAGAAGCTTAAGGATATAACCTCTGACATAAGTTTATGTCGATTACCTGGTCTTGCAATGTTTTACTCCGAGCTTGTTCAAGGTATTCCACCTATTTTCAAGCATTATGTTGCAAATGTTCCTGCACTACACTCTGTCCTTGTCTTTGTTTCCATCAAATCCTTGCCTATTAGCAGAGTCCCAATGGAAGAAAGGTTTCTTTTTCGCCGAGTAGAGCCTAAGGAACACAATATATTTCGATGTGTTGTTAGATATGGATACATCGATGTGCGCAATGAGAACGAGCCTTTTGAGAAGTTATTGGTTAAGAAGTTGAAGGAGTTTGTTGTTGACGAATATCATTTTTCTAAAAAAGTGATACAAGATGGTAAAAATGATGAACCACAAGAAGCTTTGGATGAAGAAAATGTACAAGAGGAAATTGAGAAAGAGGTTGAGGTAGTTGAAAAGGCAACAAGAGCTGGTGTTGTTCATTTGATTGGTGAAAGTGAGGTGATTGCTGGTGATGGAGCTGGCATTGCAAAGAGAATTTTGATTGATTATGCCTATAGTTTTTTGAAGAGAAATTTGAGACAAAGTGACAAAATATTTGATGTTCCTCACACACGTATGGTTAAGGTGGGAATGACTTATCAACTATAA 2301 0.3755 MASEEDEGNVVAVNMDNIQHEQHDDDNDSAKKFSSQIVRKRDSLELEAGATSNITHKSKGPSTTIILQLAFQSLGIVYGDIGTSPLYVYASIFPNGINHNDDILGALSLIFYTITLIPLLKYVFFVLRATDNGEGGTFALYSLICRYSRVGLIPNQQAEDAEVSNYQLKLPKRREKRASIVKSTLENNHFMRHFLLFSTMLGTSMVMGDGVLTPCISVLSAVGGIKQAANQITEDQIVWISVAILIGIFMVQRFGTDKVGYTFAPIICIWFAFIAIIGLYNFIKYDPSVIKAINPKYIVHYFIRNKKNAWVSLGGVVLCITGSEALFADVGHFTVRPIQLSMCFVTYPTLVLAYSGQAAFLRKHNDVVADSFYKSVPGLIYWPMFVIAVLAAIVASQAMISGTFSIIQQSLSLGCFPRVQVVHTSAKYEGQVYIPEVNYILMIACIAITIGFRTTTEIGNAYGIAVVFVMSLTSSLLVLIMIMIWKTNIFLVITYVLVISSLELVYLSSVLYKFNDGGYLPVAFAVFLMFIMFVWNNVYRRKYYYELNHKITPEKLKDITSDISLCRLPGLAMFYSELVQGIPPIFKHYVANVPALHSVLVFVSIKSLPISRVPMEERFLFRRVEPKEHNIFRCVVRYGYIDVRNENEPFEKLLVKKLKEFVVDEYHFSKKVIQDGKNDEPQEALDEENVQEEIEKEVEVVEKATRAGVVHLIGESEVIAGDGAGIAKRILIDYAYSFLKRNLRQSDKIFDVPHTRMVKVGMTYQL* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0547 766 TIGRFAM kup: potassium uptake protein 69 765 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr6g0547 766 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 24 765 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr6g0547 766 PANTHER POTASSIUM TRANSPORTER 24 765 - -
Tpr6g0547 766 Coils Coil 687 707 - -
Tpr6g0547 766 Pfam K+ potassium transporter 70 641 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr6g0547 766 MobiDBLite consensus disorder prediction 1 32 - -
Tpr6g0547 766 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0547 Tpr-Chr6 4430617 4433818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0547 15 766 Inorganic Solute Cotransporters AT4G13420 51.013 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0547 K03549 - csin:114286317 1071.61